Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SNORA40.19-201ENST00000390846 128 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL1A1P02452 AC244453.4-201ENST00000419150 388 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.18□□□□□ -2.22
COL1A1P02452 RPL30P4-201ENST00000429309 333 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AC241584.1-201ENST00000438469 1241 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AC114878.1-201ENST00000441166 358 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 NEFMP1-201ENST00000443423 1006 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 SNORD97-201ENST00000459187 142 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.18□□□□□ -2.22
COL1A1P02452 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.18□□□□□ -2.22
COL1A1P02452 MIR4765-201ENST00000585007 77 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AL121652.1-201ENST00000608851 448 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AC104820.1-201ENST00000624183 307 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.18□□□□□ -2.22
COL1A1P02452 MTCO1P23-201ENST00000415223 1526 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 RNU6-140P-201ENST00000384566 108 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 RNU6-883P-201ENST00000384597 107 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 CISD1P1-201ENST00000393907 327 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 MIR934-201ENST00000401241 83 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 NDUFS5P1-201ENST00000405668 289 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AL139098.1-201ENST00000407291 389 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.18□□□□□ -2.22
COL1A1P02452 AL355994.1-201ENST00000424379 260 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 CR848007.2-201ENST00000424918 787 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 ZNF863P-201ENST00000426746 417 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 HSPE1P21-201ENST00000438283 308 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AL049874.1-201ENST00000489560 388 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.18□□□□□ -2.22
COL1A1P02452 AC048346.1-201ENST00000510247 144 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AC107953.1-201ENST00000522216 297 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AC036111.3-201ENST00000526389 112 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.18□□□□□ -2.22
COL1A1P02452 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.18□□□□□ -2.22
COL1A1P02452 AC093519.1-201ENST00000566109 298 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AL671309.1-201ENST00000603750 544 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.18□□□□□ -2.22
COL1A1P02452 AC090970.3-201ENST00000612566 866 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AC007742.2-201ENST00000618226 398 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 AL512506.2-201ENST00000624472 458 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
COL1A1P02452 SNORD56.4-201ENST00000363883 71 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 RNU6-884P-201ENST00000363889 107 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 RNU6-619P-201ENST00000365146 108 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 AC083799.1-201ENST00000366451 910 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 RNU6-796P-201ENST00000391086 107 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 RNA5SP450-201ENST00000411206 102 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 PSMA6P3-201ENST00000428242 164 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 FABP5P14-201ENST00000437273 393 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 AC027575.1-201ENST00000481064 460 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 AC105313.1-201ENST00000509121 353 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 RNA5SP384-201ENST00000516615 116 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 SNORA31.22-201ENST00000517204 135 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 RNA5SP291-201ENST00000517222 105 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.17□□□□□ -2.22
COL1A1P02452 CBX3P8-201ENST00000532412 525 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 MTCYBP23-201ENST00000558717 1102 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 NIFKP8-201ENST00000560500 874 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 AC012435.1-202ENST00000568772 240 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.17□□□□□ -2.22
COL1A1P02452 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.17□□□□□ -2.22
COL1A1P02452 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 AL391813.1-201ENST00000603098 260 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 AL138963.2-201ENST00000605137 226 ntBASIC1.17□□□□□ -2.22
COL1A1P02452 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.17□□□□□ -2.22
COL1A1P02452 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
COL1A1P02452 MIR126-201ENST00000362291 85 ntBASIC1.16□□□□□ -2.22
COL1A1P02452 SNORD14B-201ENST00000364533 90 ntBASIC1.16□□□□□ -2.22
COL1A1P02452 RNU6-741P-201ENST00000383889 107 ntBASIC1.16□□□□□ -2.22
COL1A1P02452 RNU2-63P-201ENST00000410792 194 ntBASIC1.16□□□□□ -2.22
COL1A1P02452 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.16□□□□□ -2.22
COL1A1P02452 BPY2DP-201ENST00000422208 265 ntBASIC1.16□□□□□ -2.22
COL1A1P02452 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.16□□□□□ -2.22
COL1A1P02452 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.16□□□□□ -2.22
COL1A1P02452 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.16□□□□□ -2.22
COL1A1P02452 AL050341.1-201ENST00000447743 313 ntBASIC1.16□□□□□ -2.22
COL1A1P02452 AC008834.1-201ENST00000511612 175 ntBASIC1.16□□□□□ -2.22
COL1A1P02452 MRPS33P3-201ENST00000513456 322 ntBASIC1.16□□□□□ -2.22
COL1A1P02452 RNU6-970P-201ENST00000516312 107 ntBASIC1.16□□□□□ -2.22
COL1A1P02452 AC092451.2-201ENST00000538746 658 ntBASIC1.16□□□□□ -2.22
COL1A1P02452 AL160236.1-201ENST00000556317 195 ntBASIC1.16□□□□□ -2.22
COL1A1P02452 TEX21P-201ENST00000447107 1476 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 RNA5SP240-201ENST00000365355 128 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 SNORD116-23-201ENST00000384645 92 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 USP9YP19-201ENST00000412165 485 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 RPL21P90-201ENST00000415692 466 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 USP9YP13-201ENST00000417797 480 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 AC246680.2-201ENST00000422106 389 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.15□□□□□ -2.23
COL1A1P02452 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.15□□□□□ -2.23
COL1A1P02452 AC118282.2-201ENST00000508739 374 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.15□□□□□ -2.23
COL1A1P02452 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.15□□□□□ -2.23
COL1A1P02452 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
COL1A1P02452 AC090502.2-201ENST00000549267 280 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 NACAP3-201ENST00000552100 481 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.15□□□□□ -2.23
COL1A1P02452 AC104229.1-201ENST00000561364 255 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.15□□□□□ -2.23
COL1A1P02452 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms