Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.62□□□□□ -1.99
PDGFBP01127 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.62□□□□□ -1.99
PDGFBP01127 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.62□□□□□ -1.99
PDGFBP01127 SNORA31.3-201ENST00000516029 96 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 RNA5SP471-201ENST00000516971 106 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
PDGFBP01127 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.62□□□□□ -1.99
PDGFBP01127 RPS3AP4-201ENST00000555161 764 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.62□□□□□ -1.99
PDGFBP01127 AC024619.4-201ENST00000580924 316 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 AC097065.2-201ENST00000608159 533 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 AC103710.2-201ENST00000609912 942 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
PDGFBP01127 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.62□□□□□ -1.99
PDGFBP01127 uc_338.12-201ENST00000616344 181 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 FRG1KP-201ENST00000623592 341 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDGFBP01127 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.62□□□□□ -1.99
PDGFBP01127 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PDGFBP01127 AC093831.2-201ENST00000624393 3427 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AC092447.7-201ENST00000422212 1621 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AC004520.1-201ENST00000608362 1413 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 UBE2L2-201ENST00000254302 429 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 Y_RNA.51-201ENST00000362725 102 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 RNY1P12-201ENST00000364251 105 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 Y_RNA.226-201ENST00000364337 114 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 SNORA20.2-201ENST00000383922 131 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.61□□□□□ -1.99
PDGFBP01127 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.61□□□□□ -1.99
PDGFBP01127 RPL36AP53-201ENST00000432891 316 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AC104389.3-201ENST00000445629 235 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.61□□□□□ -1.99
PDGFBP01127 GAPDHP17-201ENST00000449858 1001 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.61□□□□□ -1.99
PDGFBP01127 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.61□□□□□ -1.99
PDGFBP01127 RN7SL75P-201ENST00000461926 281 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 RPL23AP11-201ENST00000475260 469 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 RAP1BP2-201ENST00000478270 544 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.61□□□□□ -1.99
PDGFBP01127 SCARNA17.1-201ENST00000516211 143 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 SCARNA17.2-201ENST00000516334 143 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 RN7SKP219-201ENST00000516825 296 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.61□□□□□ -1.99
PDGFBP01127 AC243972.3-201ENST00000539655 198 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.61□□□□□ -1.99
PDGFBP01127 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.61□□□□□ -1.99
PDGFBP01127 AC009163.5-201ENST00000575421 637 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AL670379.6-201ENST00000603753 252 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AL670379.11-201ENST00000604059 253 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AC008162.1-201ENST00000604718 254 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AL670379.1-201ENST00000604752 252 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AL670379.5-201ENST00000605253 252 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AL670379.12-201ENST00000605291 253 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AL670379.8-201ENST00000605353 252 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AL158032.1-201ENST00000605401 106 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AL670379.7-201ENST00000605823 252 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 MIR98-201ENST00000606724 119 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AC011939.3-201ENST00000613686 466 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 SCARNA17.4-201ENST00000614296 143 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 AC108479.2-201ENST00000617314 601 ntBASIC2.61□□□□□ -1.99
PDGFBP01127 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.61□□□□□ -1.99
PDGFBP01127 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PDGFBP01127 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
PDGFBP01127 Y_RNA.77-201ENST00000362962 107 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.6□□□□□ -1.99
PDGFBP01127 AC245054.2-201ENST00000415639 319 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 RAC1P6-201ENST00000423911 575 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.6□□□□□ -1.99
PDGFBP01127 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.6□□□□□ -1.99
PDGFBP01127 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PDGFBP01127 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.6□□□□□ -1.99
PDGFBP01127 Z83846.1-201ENST00000446798 265 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 AC233279.1-201ENST00000455300 423 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 AL122001.1-201ENST00000457027 370 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 EIF4EP3-201ENST00000498782 656 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.6□□□□□ -1.99
PDGFBP01127 MTCO3P28-201ENST00000513351 515 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.6□□□□□ -1.99
PDGFBP01127 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.6□□□□□ -1.99
PDGFBP01127 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.6□□□□□ -1.99
PDGFBP01127 MIR4635-201ENST00000583759 79 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 MIR3611-201ENST00000584484 83 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 AL391813.1-201ENST00000603098 260 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 AC007363.1-201ENST00000604736 620 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 AC016727.1-205ENST00000605437 569 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 AC091304.9-201ENST00000612091 226 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 AC093783.1-201ENST00000612976 329 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 AP001506.1-201ENST00000615444 211 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 MIR7157-201ENST00000635801 60 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.6□□□□□ -1.99
PDGFBP01127 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PDGFBP01127 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
PDGFBP01127 ADAM3A-203ENST00000461344 2157 ntBASIC2.6□□□□□ -1.99
PDGFBP01127 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PDGFBP01127 MTND5P30-201ENST00000452896 1731 ntBASIC2.59□□□□□ -1.99
PDGFBP01127 MIR26A1-201ENST00000362205 77 ntBASIC2.59□□□□□ -1.99
PDGFBP01127 RNU6-817P-201ENST00000391083 104 ntBASIC2.59□□□□□ -1.99
PDGFBP01127 RPL23AP32-201ENST00000395315 459 ntBASIC2.59□□□□□ -1.99
PDGFBP01127 HMGN2P35-201ENST00000412164 270 ntBASIC2.59□□□□□ -1.99
PDGFBP01127 BTF3L4P1-201ENST00000413813 468 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms