Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.59□□□□□ -1.83
ZBED1O96006 PRSS3P4-201ENST00000453323 162 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.59□□□□□ -1.83
ZBED1O96006 AC011005.2-201ENST00000487324 359 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 SNORA19.2-201ENST00000516013 114 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 RNU1-86P-201ENST00000516108 154 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 Y_RNA.665-201ENST00000516177 98 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 RNU1-107P-201ENST00000516617 154 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 RPL7P20-201ENST00000520308 745 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 CYCSP27-201ENST00000527643 293 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 AC090115.3-201ENST00000553218 849 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.59□□□□□ -1.83
ZBED1O96006 AC069200.1-201ENST00000609511 323 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 AC084757.4-201ENST00000616350 526 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
ZBED1O96006 AC090617.10-201ENST00000624308 134 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 MIR3199-2-201ENST00000636243 86 ntBASIC3.59□□□□□ -1.83
ZBED1O96006 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZBED1O96006 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
ZBED1O96006 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.58□□□□□ -1.84
ZBED1O96006 RNU6-266P-201ENST00000364225 107 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 RNU6-522P-201ENST00000364497 107 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 Y_RNA.324-201ENST00000365165 102 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 MT-TL1-201ENST00000386347 75 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 EIF4E2P1-201ENST00000393781 255 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 RNU6-55P-201ENST00000411092 107 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 RNU6-954P-201ENST00000411355 107 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 AL592148.1-201ENST00000413568 445 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.58□□□□□ -1.84
ZBED1O96006 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.58□□□□□ -1.84
ZBED1O96006 PGBD4P6-201ENST00000421501 610 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 BPY2DP-201ENST00000422208 265 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.58□□□□□ -1.84
ZBED1O96006 AL513185.2-201ENST00000425543 193 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 AC005300.1-201ENST00000428401 373 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 AC097713.2-201ENST00000430199 356 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.58□□□□□ -1.84
ZBED1O96006 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.58□□□□□ -1.84
ZBED1O96006 MTND3P10-201ENST00000450967 341 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 RPL21P10-201ENST00000463521 490 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 AC008155.2-201ENST00000464337 397 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 AC083904.1-201ENST00000487828 231 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.58□□□□□ -1.84
ZBED1O96006 NDUFB9P3-201ENST00000521269 501 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 AC118273.2-201ENST00000532092 465 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.58□□□□□ -1.84
ZBED1O96006 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.58□□□□□ -1.84
ZBED1O96006 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.58□□□□□ -1.84
ZBED1O96006 AC037471.2-201ENST00000564941 598 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 AC018638.8-201ENST00000588755 281 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 AC002044.1-201ENST00000606707 158 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 AP003122.6-201ENST00000623831 495 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ZBED1O96006 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZBED1O96006 AC093536.2-201ENST00000565257 1406 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZBED1O96006 AC007496.3-201ENST00000624987 3443 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZBED1O96006 AL513302.2-201ENST00000562313 1842 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 AL356274.2-201ENST00000624379 3752 ntBASIC3.58□□□□□ -1.84
ZBED1O96006 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.58□□□□□ -1.84
ZBED1O96006 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZBED1O96006 AC058791.1-201ENST00000608412 3198 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.57□□□□□ -1.84
ZBED1O96006 MIR30E-201ENST00000362104 92 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 SNORA63.1-201ENST00000362493 131 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 RNU1-105P-201ENST00000363470 161 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 SNORA32.2-201ENST00000384049 122 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 Y_RNA.530-201ENST00000384587 101 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZBED1O96006 RAP1BP3-201ENST00000407180 549 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZBED1O96006 Z99755.1-201ENST00000414048 380 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 AP000907.1-201ENST00000428428 510 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZBED1O96006 RPS15AP5-201ENST00000436276 388 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 AC005019.1-201ENST00000436455 431 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.57□□□□□ -1.84
ZBED1O96006 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.57□□□□□ -1.84
ZBED1O96006 RPL23AP67-201ENST00000465341 474 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 AC093663.1-201ENST00000497190 394 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.57□□□□□ -1.84
ZBED1O96006 SNORA14.1-201ENST00000516113 141 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 AC107934.2-201ENST00000518653 310 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 AC023050.3-201ENST00000541142 333 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 AC011611.1-201ENST00000552179 197 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 CYCSP39-201ENST00000565821 309 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 AC121333.1-201ENST00000567488 2709 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 MIR548S-201ENST00000581352 82 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.57□□□□□ -1.84
ZBED1O96006 AC011712.1-201ENST00000588959 234 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 AC087045.1-201ENST00000605856 382 ntBASIC3.57□□□□□ -1.84
ZBED1O96006 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.57□□□□□ -1.84
ZBED1O96006 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
ZBED1O96006 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
ZBED1O96006 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.56□□□□□ -1.84
ZBED1O96006 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZBED1O96006 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms