Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC091152.3-201ENST00000604227 325 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 AC012493.3-201ENST00000604494 112 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 AP000860.1-201ENST00000605250 559 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 Y_RNA.783-201ENST00000613546 102 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 DUXAP9-208ENST00000622815 614 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 PISRT1-201ENST00000626175 531 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SEMA3DO95025 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SEMA3DO95025 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SEMA3DO95025 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.88□□□□□ -2.11
SEMA3DO95025 Y_RNA.18-201ENST00000362461 102 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 Y_RNA.97-201ENST00000363094 102 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 RNU6-188P-201ENST00000364207 107 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 SNORA67.3-201ENST00000384366 140 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 AL512604.1-201ENST00000404812 257 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 RNU2-36P-201ENST00000410361 191 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 ELOCP17-201ENST00000414751 326 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.88□□□□□ -2.11
SEMA3DO95025 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.88□□□□□ -2.11
SEMA3DO95025 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.88□□□□□ -2.11
SEMA3DO95025 RPL32P28-201ENST00000443577 397 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 GDI2P2-201ENST00000445131 608 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.88□□□□□ -2.11
SEMA3DO95025 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.88□□□□□ -2.11
SEMA3DO95025 HMGB3P17-201ENST00000504195 649 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 AC116347.2-201ENST00000514912 523 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 RNU6-581P-201ENST00000516214 105 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 MTND2P32-201ENST00000521584 1038 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.88□□□□□ -2.11
SEMA3DO95025 AC118273.2-201ENST00000532092 465 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.88□□□□□ -2.11
SEMA3DO95025 MRPS36P5-201ENST00000551909 298 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 AC090888.2-201ENST00000559765 1144 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.88□□□□□ -2.11
SEMA3DO95025 AL354943.1-201ENST00000572103 781 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SEMA3DO95025 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.88□□□□□ -2.11
SEMA3DO95025 AL358072.1-201ENST00000604156 575 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 AL355598.1-201ENST00000604169 202 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 AC018714.1-201ENST00000605028 208 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 AL021997.1-201ENST00000605757 193 ntBASIC1.88□□□□□ -2.11
SEMA3DO95025 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.88□□□□□ -2.11
SEMA3DO95025 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SEMA3DO95025 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SEMA3DO95025 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
SEMA3DO95025 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SEMA3DO95025 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SEMA3DO95025 FCF1P10-201ENST00000407590 479 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 RNU2-2P-201ENST00000410396 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.87□□□□□ -2.11
SEMA3DO95025 AC104454.1-201ENST00000421341 1401 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.87□□□□□ -2.11
SEMA3DO95025 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.87□□□□□ -2.11
SEMA3DO95025 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.87□□□□□ -2.11
SEMA3DO95025 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SEMA3DO95025 AL354941.1-201ENST00000438600 464 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.87□□□□□ -2.11
SEMA3DO95025 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.87□□□□□ -2.11
SEMA3DO95025 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.87□□□□□ -2.11
SEMA3DO95025 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.87□□□□□ -2.11
SEMA3DO95025 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SEMA3DO95025 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.87□□□□□ -2.11
SEMA3DO95025 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.87□□□□□ -2.11
SEMA3DO95025 MIR892C-201ENST00000516410 77 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.87□□□□□ -2.11
SEMA3DO95025 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.87□□□□□ -2.11
SEMA3DO95025 OR11H5P-201ENST00000554039 926 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 ROCK1P1-201ENST00000573767 549 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.87□□□□□ -2.11
SEMA3DO95025 AC090897.2-201ENST00000581715 130 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 AP001004.1-201ENST00000582468 324 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 AP001981.2-201ENST00000603241 418 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 AC024933.1-201ENST00000608472 348 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 TUSC7.1-201ENST00000610969 165 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.15-201ENST00000611544 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.16-201ENST00000613119 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 AC011939.3-201ENST00000613686 466 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.12-201ENST00000613778 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.20-201ENST00000613956 192 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.9-201ENST00000615427 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.11-201ENST00000616345 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.2-201ENST00000616535 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.3-201ENST00000617785 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.19-201ENST00000618602 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 RNU2-1-201ENST00000618664 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.6-201ENST00000619225 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.5-201ENST00000619465 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U2.10-201ENST00000620268 191 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 AL589994.2-201ENST00000621124 579 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 YWHAEP7-203ENST00000622054 312 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 AP002782.1-201ENST00000623107 614 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 U6.99-201ENST00000637524 83 ntBASIC1.87□□□□□ -2.11
SEMA3DO95025 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.86□□□□□ -2.11
SEMA3DO95025 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SEMA3DO95025 RNY4P16-201ENST00000364768 94 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 RNU6-809P-201ENST00000384461 107 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 MIR147B-201ENST00000390185 80 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms