Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.82□□□□□ -1.8
CDKL5O76039 AC245291.1-201ENST00000419501 328 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 PMCHL1-202ENST00000423102 261 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 TRIAP1P1-201ENST00000427062 225 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 AC090774.1-201ENST00000435925 246 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.82□□□□□ -1.8
CDKL5O76039 AC104058.1-201ENST00000448028 297 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 CYCSP35-201ENST00000451978 304 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.82□□□□□ -1.8
CDKL5O76039 MTCO3P10-201ENST00000455912 772 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 RN7SL293P-201ENST00000481765 281 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.82□□□□□ -1.8
CDKL5O76039 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.82□□□□□ -1.8
CDKL5O76039 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.82□□□□□ -1.8
CDKL5O76039 AP006587.4-201ENST00000526053 529 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 AC093012.1-202ENST00000549403 582 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.82□□□□□ -1.8
CDKL5O76039 AC074050.1-201ENST00000563247 211 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 AC106782.4-201ENST00000568264 210 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 AL138889.2-201ENST00000603883 242 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 uc_338.22-201ENST00000622722 187 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.82□□□□□ -1.8
CDKL5O76039 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL5O76039 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL5O76039 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CDKL5O76039 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDKL5O76039 ZNF519P1-201ENST00000449011 1626 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 Y_RNA.145-201ENST00000363527 102 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 RNA5SP189-201ENST00000364920 115 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 SNORD116-11-201ENST00000383882 92 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 MIR23B-201ENST00000384832 97 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 RNA5SP229-201ENST00000410809 99 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 PPP1R11P2-201ENST00000423543 382 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.81□□□□□ -1.8
CDKL5O76039 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.81□□□□□ -1.8
CDKL5O76039 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.81□□□□□ -1.8
CDKL5O76039 RPL21P103-201ENST00000479921 488 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CDKL5O76039 AC008526.1-201ENST00000509149 338 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 RNU6-1046P-201ENST00000516538 107 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.81□□□□□ -1.8
CDKL5O76039 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.81□□□□□ -1.8
CDKL5O76039 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.81□□□□□ -1.8
CDKL5O76039 DNAJC8P1-201ENST00000554535 372 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.81□□□□□ -1.8
CDKL5O76039 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.81□□□□□ -1.8
CDKL5O76039 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.81□□□□□ -1.8
CDKL5O76039 AC008737.2-201ENST00000599446 118 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.81□□□□□ -1.8
CDKL5O76039 AL138726.1-201ENST00000614873 333 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 AC008121.3-201ENST00000618726 433 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDKL5O76039 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDKL5O76039 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CDKL5O76039 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDKL5O76039 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
CDKL5O76039 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDKL5O76039 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDKL5O76039 RNA5SP295-201ENST00000362655 121 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 RNA5SP383-201ENST00000362934 120 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 RNU6-601P-201ENST00000384540 107 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 MIR490-201ENST00000384865 128 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 CISD1P1-201ENST00000393907 327 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 MIR450B-201ENST00000401182 78 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 AL139039.1-201ENST00000401900 692 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 AL139397.2-201ENST00000404529 772 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 RNU2-43P-201ENST00000410306 190 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 RNA5SP111-201ENST00000411386 101 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 MTND3P2-201ENST00000438452 342 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 NEFMP1-201ENST00000443423 1006 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 AC115115.1-201ENST00000449927 248 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 RPL30P15-201ENST00000457129 321 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 Y_RNA.653-201ENST00000459091 95 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 RPL21P10-201ENST00000463521 490 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 SLC25A15P5-201ENST00000508033 253 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 MTCYBP40-201ENST00000509390 1135 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 Y_RNA.689-201ENST00000516589 107 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 RNU6-1213P-201ENST00000517075 94 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.8□□□□□ -1.8
CDKL5O76039 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.8□□□□□ -1.8
CDKL5O76039 AC022634.1-201ENST00000520765 532 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 AC104027.1-201ENST00000521887 300 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDKL5O76039 AC018630.1-201ENST00000541376 925 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 HIGD1AP1-201ENST00000550979 275 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 SNRPGP18-201ENST00000553000 214 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 AC136443.5-201ENST00000603741 370 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 AL162713.1-201ENST00000604480 262 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 RNA5SP108-201ENST00000605921 117 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.8□□□□□ -1.8
CDKL5O76039 U73479.1-201ENST00000618062 168 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 AC007998.5-201ENST00000622938 237 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDKL5O76039 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.8□□□□□ -1.8
CDKL5O76039 MTND5P27-201ENST00000428871 1720 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.8□□□□□ -1.8
CDKL5O76039 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.8□□□□□ -1.8
CDKL5O76039 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.8□□□□□ -1.8
CDKL5O76039 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms