Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AL136380.1-201ENST00000447970 162 ntBASIC1.95□□□□□ -2.1
NPHP4O75161 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.95□□□□□ -2.1
NPHP4O75161 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.95□□□□□ -2.1
NPHP4O75161 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.95□□□□□ -2.1
NPHP4O75161 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.95□□□□□ -2.1
NPHP4O75161 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.95□□□□□ -2.1
NPHP4O75161 UBE2L4-201ENST00000587688 464 ntBASIC1.95□□□□□ -2.1
NPHP4O75161 AC011477.1-204ENST00000623416 1325 ntBASIC1.95□□□□□ -2.1
NPHP4O75161 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NPHP4O75161 AC121333.1-201ENST00000567488 2709 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NPHP4O75161 Y_RNA.311-201ENST00000365068 96 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 Z80107.1-201ENST00000436830 412 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.94□□□□□ -2.1
NPHP4O75161 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.94□□□□□ -2.1
NPHP4O75161 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NPHP4O75161 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.94□□□□□ -2.1
NPHP4O75161 HMGN2P18-201ENST00000450680 270 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.94□□□□□ -2.1
NPHP4O75161 AL139109.1-201ENST00000455491 297 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.94□□□□□ -2.1
NPHP4O75161 AC098591.2-201ENST00000510152 315 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 RNA5SP290-201ENST00000517133 127 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.94□□□□□ -2.1
NPHP4O75161 MTCO2P15-201ENST00000532655 656 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.94□□□□□ -2.1
NPHP4O75161 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.94□□□□□ -2.1
NPHP4O75161 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.94□□□□□ -2.1
NPHP4O75161 AC011712.1-201ENST00000588959 234 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.94□□□□□ -2.1
NPHP4O75161 AP000403.1-201ENST00000603349 851 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 AC004805.2-201ENST00000605382 482 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.94□□□□□ -2.1
NPHP4O75161 MIR4275-201ENST00000636486 87 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 AL390862.1-201ENST00000635467 1469 ntBASIC1.94□□□□□ -2.1
NPHP4O75161 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NPHP4O75161 RNU6-853P-201ENST00000364306 107 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 SNORD116.1-201ENST00000365628 92 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 RNU6-413P-201ENST00000384115 107 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 SNORA40.6-201ENST00000391153 128 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 AL590084.2-201ENST00000401481 382 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 USP9YP33-201ENST00000412220 421 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 USP9YP11-201ENST00000427537 717 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.93□□□□□ -2.1
NPHP4O75161 USP9YP35-201ENST00000435696 412 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.93□□□□□ -2.1
NPHP4O75161 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.93□□□□□ -2.1
NPHP4O75161 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.93□□□□□ -2.1
NPHP4O75161 CECR9-201ENST00000453421 199 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 AC104563.1-201ENST00000476147 376 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 RPS27AP10-201ENST00000496103 208 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 AC024589.1-201ENST00000512207 263 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.93□□□□□ -2.1
NPHP4O75161 AC023538.1-201ENST00000534576 736 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.93□□□□□ -2.1
NPHP4O75161 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.93□□□□□ -2.1
NPHP4O75161 AC060771.1-201ENST00000582031 164 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 AC021171.1-201ENST00000603137 706 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 DPPA3P3-201ENST00000603842 430 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 AC021749.1-201ENST00000604322 607 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 BNIP3P31-201ENST00000604515 566 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.93□□□□□ -2.1
NPHP4O75161 AC112204.3-201ENST00000623822 332 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 AC013437.2-201ENST00000639587 677 ntBASIC1.93□□□□□ -2.1
NPHP4O75161 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NPHP4O75161 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.93□□□□□ -2.1
NPHP4O75161 RNU6-234P-201ENST00000365229 104 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 RNU1-52P-201ENST00000384190 164 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 RNU6-220P-201ENST00000390919 107 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 MIR888-201ENST00000401186 77 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 ERHP2-201ENST00000402323 299 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 AL136310.1-201ENST00000404926 654 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 RNU4-72P-201ENST00000410754 173 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 RPS12P24-201ENST00000412619 387 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.92□□□□□ -2.1
NPHP4O75161 BPY2DP-201ENST00000422208 265 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 SKA2P1-201ENST00000425592 390 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.92□□□□□ -2.1
NPHP4O75161 USP12PX-201ENST00000432383 1057 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 RPS25P9-201ENST00000435591 252 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 SNRPEP9-201ENST00000436794 238 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 AL117351.1-201ENST00000438864 766 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.92□□□□□ -2.1
NPHP4O75161 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.92□□□□□ -2.1
NPHP4O75161 AL160314.1-201ENST00000490836 438 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.92□□□□□ -2.1
NPHP4O75161 AC079395.1-201ENST00000510981 262 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 SNORA31.6-201ENST00000516241 130 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 RNU2-44P-201ENST00000516795 194 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 SNORA31.18-201ENST00000517043 134 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 SNORA31.23-201ENST00000517219 133 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 BTF3P12-201ENST00000519620 469 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.92□□□□□ -2.1
NPHP4O75161 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.92□□□□□ -2.1
NPHP4O75161 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.92□□□□□ -2.1
NPHP4O75161 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.92□□□□□ -2.1
NPHP4O75161 AL391646.1-201ENST00000603860 190 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 AC090186.1-201ENST00000605991 572 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 AC107075.1-201ENST00000613695 314 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms