Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SSX4O60224 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.81□□□□□ -1.96
SSX4O60224 AL139276.1-201ENST00000311910 1001 ntBASIC2.81□□□□□ -1.96
SSX4O60224 RNU6-552P-201ENST00000362869 119 ntBASIC2.81□□□□□ -1.96
SSX4O60224 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.81□□□□□ -1.96
SSX4O60224 RNU6-1027P-201ENST00000383998 107 ntBASIC2.81□□□□□ -1.96
SSX4O60224 RNU6-517P-201ENST00000384362 110 ntBASIC2.81□□□□□ -1.96
SSX4O60224 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SSX4O60224 AL590002.1-201ENST00000406554 418 ntBASIC2.81□□□□□ -1.96
SSX4O60224 RNA5SP229-201ENST00000410809 99 ntBASIC2.81□□□□□ -1.96
SSX4O60224 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.81□□□□□ -1.96
SSX4O60224 RPL21P90-201ENST00000415692 466 ntBASIC2.81□□□□□ -1.96
SSX4O60224 GTF2IP20-201ENST00000431663 360 ntBASIC2.81□□□□□ -1.96
SSX4O60224 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.81□□□□□ -1.96
SSX4O60224 RPS15AP5-201ENST00000436276 388 ntBASIC2.81□□□□□ -1.96
SSX4O60224 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX4O60224 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX4O60224 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX4O60224 AC083798.1-201ENST00000472671 131 ntBASIC2.81□□□□□ -1.96
SSX4O60224 RPL21P13-201ENST00000488305 481 ntBASIC2.81□□□□□ -1.96
SSX4O60224 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX4O60224 RAC1P5-201ENST00000512182 576 ntBASIC2.81□□□□□ -1.96
SSX4O60224 AC090136.1-201ENST00000520009 240 ntBASIC2.81□□□□□ -1.96
SSX4O60224 AC022634.1-201ENST00000520765 532 ntBASIC2.81□□□□□ -1.96
SSX4O60224 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.81□□□□□ -1.96
SSX4O60224 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.81□□□□□ -1.96
SSX4O60224 NACAP3-201ENST00000552100 481 ntBASIC2.81□□□□□ -1.96
SSX4O60224 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX4O60224 HMGB1P33-201ENST00000563485 527 ntBASIC2.81□□□□□ -1.96
SSX4O60224 TPRKBP2-201ENST00000565969 475 ntBASIC2.81□□□□□ -1.96
SSX4O60224 AC015917.1-201ENST00000579654 510 ntBASIC2.81□□□□□ -1.96
SSX4O60224 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX4O60224 AC078899.3-201ENST00000599065 212 ntBASIC2.81□□□□□ -1.96
SSX4O60224 AC093788.1-201ENST00000609356 927 ntBASIC2.81□□□□□ -1.96
SSX4O60224 AC013562.2-201ENST00000611632 603 ntBASIC2.81□□□□□ -1.96
SSX4O60224 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.81□□□□□ -1.96
SSX4O60224 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SSX4O60224 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSX4O60224 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.8□□□□□ -1.96
SSX4O60224 SNORD3E-201ENST00000362899 217 ntBASIC2.8□□□□□ -1.96
SSX4O60224 Y_RNA.255-201ENST00000364581 97 ntBASIC2.8□□□□□ -1.96
SSX4O60224 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SSX4O60224 Y_RNA.554-201ENST00000384672 102 ntBASIC2.8□□□□□ -1.96
SSX4O60224 MIR181A1-201ENST00000385026 110 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AL356057.2-201ENST00000403318 432 ntBASIC2.8□□□□□ -1.96
SSX4O60224 RNU4-47P-201ENST00000410876 114 ntBASIC2.8□□□□□ -1.96
SSX4O60224 COTL1P1-201ENST00000422309 375 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AL078601.1-201ENST00000444542 271 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX4O60224 WASF1P1-201ENST00000447560 1131 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AL360271.2-201ENST00000447710 161 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AC003071.1-201ENST00000451219 789 ntBASIC2.8□□□□□ -1.96
SSX4O60224 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX4O60224 AC128713.1-201ENST00000471495 306 ntBASIC2.8□□□□□ -1.96
SSX4O60224 TRBV1-201ENST00000476502 284 ntBASIC2.8□□□□□ -1.96
SSX4O60224 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.8□□□□□ -1.96
SSX4O60224 RPS27P26-201ENST00000494583 239 ntBASIC2.8□□□□□ -1.96
SSX4O60224 MTCO3P9-201ENST00000506989 781 ntBASIC2.8□□□□□ -1.96
SSX4O60224 Y_RNA.704-201ENST00000516851 102 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.8□□□□□ -1.96
SSX4O60224 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX4O60224 AK6P1-201ENST00000540219 478 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.8□□□□□ -1.96
SSX4O60224 AC027807.1-201ENST00000559921 996 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX4O60224 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.8□□□□□ -1.96
SSX4O60224 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.8□□□□□ -1.96
SSX4O60224 CYCSP39-201ENST00000565821 309 ntBASIC2.8□□□□□ -1.96
SSX4O60224 MIR4782-201ENST00000577987 79 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX4O60224 BNIP3P30-201ENST00000601184 574 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AC025165.5-201ENST00000602802 578 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AC080078.2-201ENST00000603766 501 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AC004492.1-201ENST00000607036 742 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AL591516.1-201ENST00000611326 274 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AC006386.2-201ENST00000624491 75 ntBASIC2.8□□□□□ -1.96
SSX4O60224 AC012005.1-201ENST00000624575 75 ntBASIC2.8□□□□□ -1.96
SSX4O60224 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SSX4O60224 AC008669.1-201ENST00000565823 2178 ntBASIC2.8□□□□□ -1.96
SSX4O60224 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SSX4O60224 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.79□□□□□ -1.96
SSX4O60224 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.79□□□□□ -1.96
SSX4O60224 AC009487.2-201ENST00000420969 6821 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AL354685.2-201ENST00000448218 1447 ntBASIC2.79□□□□□ -1.96
SSX4O60224 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.79□□□□□ -1.96
SSX4O60224 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SSX4O60224 MIR422A-201ENST00000362286 90 ntBASIC2.79□□□□□ -1.96
SSX4O60224 RNU1-105P-201ENST00000363470 161 ntBASIC2.79□□□□□ -1.96
SSX4O60224 RNA5SP139-201ENST00000364340 117 ntBASIC2.79□□□□□ -1.96
SSX4O60224 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SSX4O60224 Z98749.2-208ENST00000381646 500 ntBASIC2.79□□□□□ -1.96
SSX4O60224 RNU6-166P-201ENST00000384371 107 ntBASIC2.79□□□□□ -1.96
SSX4O60224 Y_RNA.505-201ENST00000384489 102 ntBASIC2.79□□□□□ -1.96
SSX4O60224 RNU6-1179P-201ENST00000384667 107 ntBASIC2.79□□□□□ -1.96
SSX4O60224 MIR767-201ENST00000390228 109 ntBASIC2.79□□□□□ -1.96
SSX4O60224 RNA5SP354-201ENST00000391247 136 ntBASIC2.79□□□□□ -1.96
SSX4O60224 RNU2-49P-201ENST00000410666 184 ntBASIC2.79□□□□□ -1.96
SSX4O60224 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX4O60224 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX4O60224 AC009414.1-201ENST00000427200 443 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms