Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 AC073544.1-201ENST00000600110 1595 ntBASIC3.51□□□□□ -1.85
RRP9O43818 MTND4P29-201ENST00000503122 1372 ntBASIC3.51□□□□□ -1.85
RRP9O43818 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.5□□□□□ -1.85
RRP9O43818 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.5□□□□□ -1.85
RRP9O43818 ZNF807-201ENST00000328088 1707 ntBASIC3.5□□□□□ -1.85
RRP9O43818 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RRP9O43818 Y_RNA.61-201ENST00000362835 102 ntBASIC3.5□□□□□ -1.85
RRP9O43818 Y_RNA.529-201ENST00000384586 119 ntBASIC3.5□□□□□ -1.85
RRP9O43818 RNU6-1179P-201ENST00000384667 107 ntBASIC3.5□□□□□ -1.85
RRP9O43818 AL122016.1-201ENST00000403365 367 ntBASIC3.5□□□□□ -1.85
RRP9O43818 FAT1P1-201ENST00000406588 507 ntBASIC3.5□□□□□ -1.85
RRP9O43818 AL591034.1-201ENST00000407447 340 ntBASIC3.5□□□□□ -1.85
RRP9O43818 RNU2-68P-201ENST00000410878 191 ntBASIC3.5□□□□□ -1.85
RRP9O43818 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.5□□□□□ -1.85
RRP9O43818 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.5□□□□□ -1.85
RRP9O43818 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.5□□□□□ -1.85
RRP9O43818 SNRPEP9-201ENST00000436794 238 ntBASIC3.5□□□□□ -1.85
RRP9O43818 CST9LP2-201ENST00000437612 320 ntBASIC3.5□□□□□ -1.85
RRP9O43818 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.5□□□□□ -1.85
RRP9O43818 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.5□□□□□ -1.85
RRP9O43818 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.5□□□□□ -1.85
RRP9O43818 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.5□□□□□ -1.85
RRP9O43818 HMGB1P30-201ENST00000492455 606 ntBASIC3.5□□□□□ -1.85
RRP9O43818 AC022493.1-201ENST00000492984 337 ntBASIC3.5□□□□□ -1.85
RRP9O43818 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.5□□□□□ -1.85
RRP9O43818 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.5□□□□□ -1.85
RRP9O43818 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.5□□□□□ -1.85
RRP9O43818 AC099522.1-202ENST00000514718 367 ntBASIC3.5□□□□□ -1.85
RRP9O43818 RNA5SP164-201ENST00000516533 110 ntBASIC3.5□□□□□ -1.85
RRP9O43818 SNORA31.15-201ENST00000516771 132 ntBASIC3.5□□□□□ -1.85
RRP9O43818 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.5□□□□□ -1.85
RRP9O43818 AC105029.1-201ENST00000520250 669 ntBASIC3.5□□□□□ -1.85
RRP9O43818 CYCSP27-201ENST00000527643 293 ntBASIC3.5□□□□□ -1.85
RRP9O43818 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.5□□□□□ -1.85
RRP9O43818 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.5□□□□□ -1.85
RRP9O43818 AC011611.1-201ENST00000552179 197 ntBASIC3.5□□□□□ -1.85
RRP9O43818 RPS3AP23-202ENST00000574601 686 ntBASIC3.5□□□□□ -1.85
RRP9O43818 AC004805.2-201ENST00000605382 482 ntBASIC3.5□□□□□ -1.85
RRP9O43818 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RRP9O43818 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.5□□□□□ -1.85
RRP9O43818 AC009233.1-201ENST00000616477 371 ntBASIC3.5□□□□□ -1.85
RRP9O43818 RMST_7.1-201ENST00000621935 268 ntBASIC3.5□□□□□ -1.85
RRP9O43818 AC027309.3-201ENST00000623419 351 ntBASIC3.5□□□□□ -1.85
RRP9O43818 AL359697.1-201ENST00000624879 587 ntBASIC3.5□□□□□ -1.85
RRP9O43818 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.5□□□□□ -1.85
RRP9O43818 FO624990.1-201ENST00000636373 85 ntBASIC3.5□□□□□ -1.85
RRP9O43818 CUL1P1-201ENST00000509510 2425 ntBASIC3.5□□□□□ -1.85
RRP9O43818 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RRP9O43818 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.49□□□□□ -1.85
RRP9O43818 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RRP9O43818 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
RRP9O43818 RNU6-140P-201ENST00000384566 108 ntBASIC3.49□□□□□ -1.85
RRP9O43818 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RRP9O43818 MIR1289-1-201ENST00000408836 144 ntBASIC3.49□□□□□ -1.85
RRP9O43818 ELOCP19-201ENST00000411919 318 ntBASIC3.49□□□□□ -1.85
RRP9O43818 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.49□□□□□ -1.85
RRP9O43818 RPEP3-201ENST00000425462 676 ntBASIC3.49□□□□□ -1.85
RRP9O43818 H2AFZP6-201ENST00000444403 394 ntBASIC3.49□□□□□ -1.85
RRP9O43818 RNA5SP310-201ENST00000459084 116 ntBASIC3.49□□□□□ -1.85
RRP9O43818 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.49□□□□□ -1.85
RRP9O43818 RN7SL297P-201ENST00000483161 293 ntBASIC3.49□□□□□ -1.85
RRP9O43818 RN7SL604P-201ENST00000492589 296 ntBASIC3.49□□□□□ -1.85
RRP9O43818 MTND3P25-201ENST00000509243 135 ntBASIC3.49□□□□□ -1.85
RRP9O43818 FGF7P4-201ENST00000509595 295 ntBASIC3.49□□□□□ -1.85
RRP9O43818 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.49□□□□□ -1.85
RRP9O43818 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.49□□□□□ -1.85
RRP9O43818 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.49□□□□□ -1.85
RRP9O43818 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.49□□□□□ -1.85
RRP9O43818 AP000889.2-201ENST00000532684 490 ntBASIC3.49□□□□□ -1.85
RRP9O43818 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.49□□□□□ -1.85
RRP9O43818 MIR4277-201ENST00000578298 84 ntBASIC3.49□□□□□ -1.85
RRP9O43818 LRRC37A5P-203ENST00000580181 585 ntBASIC3.49□□□□□ -1.85
RRP9O43818 AC087045.1-201ENST00000605856 382 ntBASIC3.49□□□□□ -1.85
RRP9O43818 AL132765.2-201ENST00000610812 351 ntBASIC3.49□□□□□ -1.85
RRP9O43818 AL121757.2-201ENST00000611223 313 ntBASIC3.49□□□□□ -1.85
RRP9O43818 AC099506.2-201ENST00000623074 221 ntBASIC3.49□□□□□ -1.85
RRP9O43818 AC112487.2-201ENST00000637950 304 ntBASIC3.49□□□□□ -1.85
RRP9O43818 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RRP9O43818 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
RRP9O43818 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.49□□□□□ -1.85
RRP9O43818 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RRP9O43818 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
RRP9O43818 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RRP9O43818 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RRP9O43818 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.48□□□□□ -1.85
RRP9O43818 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RRP9O43818 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RRP9O43818 RNU6-1252P-201ENST00000363054 104 ntBASIC3.48□□□□□ -1.85
RRP9O43818 RNU6-254P-201ENST00000363377 107 ntBASIC3.48□□□□□ -1.85
RRP9O43818 Y_RNA.184-201ENST00000363884 108 ntBASIC3.48□□□□□ -1.85
RRP9O43818 RNU1-32P-201ENST00000363937 159 ntBASIC3.48□□□□□ -1.85
RRP9O43818 RNU6-266P-201ENST00000364225 107 ntBASIC3.48□□□□□ -1.85
RRP9O43818 RNU6-1303P-201ENST00000364841 107 ntBASIC3.48□□□□□ -1.85
RRP9O43818 AC068538.1-201ENST00000376856 336 ntBASIC3.48□□□□□ -1.85
RRP9O43818 RNU6-217P-201ENST00000384164 104 ntBASIC3.48□□□□□ -1.85
RRP9O43818 RNU6-607P-201ENST00000411283 108 ntBASIC3.48□□□□□ -1.85
RRP9O43818 AC011933.1-201ENST00000413334 321 ntBASIC3.48□□□□□ -1.85
RRP9O43818 AL353621.1-201ENST00000418219 243 ntBASIC3.48□□□□□ -1.85
RRP9O43818 RPL18P10-201ENST00000425606 538 ntBASIC3.48□□□□□ -1.85
RRP9O43818 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms