Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.3□□□□□ -1.88
SMAD6O43541 APOOP3-201ENST00000536787 586 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.3□□□□□ -1.88
SMAD6O43541 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SMAD6O43541 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.3□□□□□ -1.88
SMAD6O43541 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SMAD6O43541 AL121603.1-201ENST00000553815 142 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 DNAJC8P1-201ENST00000554535 372 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 MIR2682-201ENST00000580305 110 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.3□□□□□ -1.88
SMAD6O43541 AC010205.1-201ENST00000616668 449 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 MIR8057-201ENST00000620957 69 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 AC011155.2-201ENST00000623202 216 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 AC091925.2-201ENST00000625059 256 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.3□□□□□ -1.88
SMAD6O43541 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMAD6O43541 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMAD6O43541 ZNF807-201ENST00000328088 1707 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SMAD6O43541 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMAD6O43541 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SMAD6O43541 RNU6-1252P-201ENST00000363054 104 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 RNU6-179P-201ENST00000363350 107 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 RNU6-188P-201ENST00000364207 107 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 SNORA22B-201ENST00000383876 138 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 Y_RNA.395-201ENST00000383945 109 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 MTCYBP4-201ENST00000401524 249 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 AC114491.1-201ENST00000416095 246 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 ARL5AP1-201ENST00000418991 388 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.29□□□□□ -1.88
SMAD6O43541 AC006028.1-201ENST00000438379 402 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.29□□□□□ -1.88
SMAD6O43541 AC016696.1-201ENST00000446949 318 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.29□□□□□ -1.88
SMAD6O43541 RNU7-152P-201ENST00000458982 64 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.29□□□□□ -1.88
SMAD6O43541 AC110794.1-201ENST00000505816 425 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 RNU6-27P-201ENST00000516146 107 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 RNU6-64P-201ENST00000517119 105 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 NDUFB9P3-201ENST00000521269 501 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 FAM60DP-201ENST00000524174 632 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.29□□□□□ -1.88
SMAD6O43541 AC024619.4-201ENST00000580924 316 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.29□□□□□ -1.88
SMAD6O43541 DPPA3P3-201ENST00000603842 430 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 AC106900.2-201ENST00000604994 317 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 AC019193.3-201ENST00000609144 554 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.29□□□□□ -1.88
SMAD6O43541 U6.114-201ENST00000636407 96 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMAD6O43541 MTND5P16-201ENST00000460269 1703 ntBASIC3.29□□□□□ -1.88
SMAD6O43541 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMAD6O43541 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMAD6O43541 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMAD6O43541 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMAD6O43541 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.28□□□□□ -1.88
SMAD6O43541 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 FAM35CP-201ENST00000554755 2470 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.28□□□□□ -1.88
SMAD6O43541 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SMAD6O43541 RNU1-75P-201ENST00000347264 129 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 RNA5SP374-201ENST00000362939 125 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 SNORD115-7-201ENST00000365306 82 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.28□□□□□ -1.88
SMAD6O43541 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SMAD6O43541 RNU6-308P-201ENST00000390957 107 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 RNU6-370P-201ENST00000411008 104 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AC074085.1-201ENST00000413598 418 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.28□□□□□ -1.88
SMAD6O43541 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.28□□□□□ -1.88
SMAD6O43541 BX679664.1-201ENST00000434429 253 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AC107399.1-201ENST00000451226 265 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.28□□□□□ -1.88
SMAD6O43541 Y_RNA.654-201ENST00000497848 106 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AC021146.2-201ENST00000504736 556 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 MTCO3P44-201ENST00000510977 541 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.28□□□□□ -1.88
SMAD6O43541 AC093303.1-201ENST00000514549 295 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.28□□□□□ -1.88
SMAD6O43541 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.28□□□□□ -1.88
SMAD6O43541 COPS8P3-201ENST00000526024 482 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AP000889.2-201ENST00000532684 490 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AP000763.2-201ENST00000540641 163 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.28□□□□□ -1.88
SMAD6O43541 AL355836.1-201ENST00000555951 870 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 OR4H12P-201ENST00000556269 907 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 MIR5004-201ENST00000579078 107 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AC012493.2-201ENST00000595083 291 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AL670379.11-201ENST00000604059 253 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AL670379.10-201ENST00000604330 253 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AL670379.12-201ENST00000605291 253 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AL670379.9-201ENST00000605428 253 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.28□□□□□ -1.88
SMAD6O43541 AL157817.1-201ENST00000614264 790 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AP001486.3-201ENST00000615334 372 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AC091953.5-201ENST00000622919 233 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 AC025034.2-201ENST00000623264 286 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms