Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.29□□□□□ -1.88
MSI1O43347 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.29□□□□□ -1.88
MSI1O43347 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.29□□□□□ -1.88
MSI1O43347 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
MSI1O43347 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.29□□□□□ -1.88
MSI1O43347 AL117336.2-201ENST00000602435 335 ntBASIC3.29□□□□□ -1.88
MSI1O43347 AC107294.1-201ENST00000609524 467 ntBASIC3.29□□□□□ -1.88
MSI1O43347 AC018692.3-201ENST00000623929 123 ntBASIC3.29□□□□□ -1.88
MSI1O43347 SNORA50A-202ENST00000629536 136 ntBASIC3.29□□□□□ -1.88
MSI1O43347 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.29□□□□□ -1.88
MSI1O43347 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.29□□□□□ -1.88
MSI1O43347 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
MSI1O43347 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.29□□□□□ -1.88
MSI1O43347 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MSI1O43347 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
MSI1O43347 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MSI1O43347 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MSI1O43347 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
MSI1O43347 Y_RNA.166-201ENST00000363730 102 ntBASIC3.28□□□□□ -1.88
MSI1O43347 RNU6-741P-201ENST00000383889 107 ntBASIC3.28□□□□□ -1.88
MSI1O43347 RNU6-831P-201ENST00000384548 107 ntBASIC3.28□□□□□ -1.88
MSI1O43347 POLHP1-201ENST00000411806 470 ntBASIC3.28□□□□□ -1.88
MSI1O43347 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MSI1O43347 BX682237.1-201ENST00000415016 335 ntBASIC3.28□□□□□ -1.88
MSI1O43347 NDUFB4P5-201ENST00000415445 361 ntBASIC3.28□□□□□ -1.88
MSI1O43347 ARL5AP1-201ENST00000418991 388 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AL590383.1-201ENST00000428602 75 ntBASIC3.28□□□□□ -1.88
MSI1O43347 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.28□□□□□ -1.88
MSI1O43347 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.28□□□□□ -1.88
MSI1O43347 AC009969.1-201ENST00000438726 172 ntBASIC3.28□□□□□ -1.88
MSI1O43347 PIGFP3-201ENST00000441918 722 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AC009237.8-201ENST00000445492 379 ntBASIC3.28□□□□□ -1.88
MSI1O43347 FABP5P15-201ENST00000453566 214 ntBASIC3.28□□□□□ -1.88
MSI1O43347 DYNLL1P5-201ENST00000467158 270 ntBASIC3.28□□□□□ -1.88
MSI1O43347 KC877373.1-201ENST00000479066 408 ntBASIC3.28□□□□□ -1.88
MSI1O43347 HMGB3P15-201ENST00000507326 574 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.28□□□□□ -1.88
MSI1O43347 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.28□□□□□ -1.88
MSI1O43347 RNU2-69P-201ENST00000516061 100 ntBASIC3.28□□□□□ -1.88
MSI1O43347 RNU4-49P-201ENST00000516080 140 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.28□□□□□ -1.88
MSI1O43347 AP001804.3-201ENST00000525146 880 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.28□□□□□ -1.88
MSI1O43347 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
MSI1O43347 AC087241.2-201ENST00000535801 324 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AC243972.3-201ENST00000539655 198 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AC090115.3-201ENST00000553218 849 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.28□□□□□ -1.88
MSI1O43347 MTCO3P23-201ENST00000561363 289 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.28□□□□□ -1.88
MSI1O43347 C8orf59P2-201ENST00000603441 271 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AL110115.1-201ENST00000614396 364 ntBASIC3.28□□□□□ -1.88
MSI1O43347 XIST_intron.1-201ENST00000619444 68 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AL512643.1-201ENST00000635735 524 ntBASIC3.28□□□□□ -1.88
MSI1O43347 AC121333.1-201ENST00000567488 2709 ntBASIC3.28□□□□□ -1.88
MSI1O43347 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MSI1O43347 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
MSI1O43347 AC007785.2-201ENST00000598627 1916 ntBASIC3.27□□□□□ -1.89
MSI1O43347 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.27□□□□□ -1.89
MSI1O43347 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MSI1O43347 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
MSI1O43347 MIR148B-201ENST00000362252 99 ntBASIC3.27□□□□□ -1.89
MSI1O43347 RNU6-797P-201ENST00000363101 109 ntBASIC3.27□□□□□ -1.89
MSI1O43347 Y_RNA.100-201ENST00000363141 102 ntBASIC3.27□□□□□ -1.89
MSI1O43347 RNU6-82P-201ENST00000363970 107 ntBASIC3.27□□□□□ -1.89
MSI1O43347 RNU6-371P-201ENST00000364283 108 ntBASIC3.27□□□□□ -1.89
MSI1O43347 Y_RNA.263-201ENST00000364659 114 ntBASIC3.27□□□□□ -1.89
MSI1O43347 Y_RNA.399-201ENST00000383955 105 ntBASIC3.27□□□□□ -1.89
MSI1O43347 RNU6-393P-201ENST00000384475 107 ntBASIC3.27□□□□□ -1.89
MSI1O43347 MIR578-201ENST00000384828 96 ntBASIC3.27□□□□□ -1.89
MSI1O43347 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AL356432.1-201ENST00000405809 419 ntBASIC3.27□□□□□ -1.89
MSI1O43347 RNU2-37P-201ENST00000410695 177 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.27□□□□□ -1.89
MSI1O43347 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.27□□□□□ -1.89
MSI1O43347 RPL35AP12-201ENST00000425362 338 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.27□□□□□ -1.89
MSI1O43347 NDUFB4P6-201ENST00000436819 366 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AL360271.2-201ENST00000447710 161 ntBASIC3.27□□□□□ -1.89
MSI1O43347 MTND1P11-201ENST00000456661 876 ntBASIC3.27□□□□□ -1.89
MSI1O43347 RPL21P41-201ENST00000459863 264 ntBASIC3.27□□□□□ -1.89
MSI1O43347 TRBV1-201ENST00000476502 284 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AL160314.1-201ENST00000490836 438 ntBASIC3.27□□□□□ -1.89
MSI1O43347 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.27□□□□□ -1.89
MSI1O43347 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.27□□□□□ -1.89
MSI1O43347 IGHV3-76-201ENST00000522465 295 ntBASIC3.27□□□□□ -1.89
MSI1O43347 TRAV28-201ENST00000557548 323 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.27□□□□□ -1.89
MSI1O43347 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.27□□□□□ -1.89
MSI1O43347 MIR4742-201ENST00000581069 85 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AC073539.2-201ENST00000597113 165 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AC092747.3-201ENST00000603769 301 ntBASIC3.27□□□□□ -1.89
MSI1O43347 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MSI1O43347 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.27□□□□□ -1.89
MSI1O43347 AC107294.3-201ENST00000609211 526 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AC069234.5-201ENST00000611056 416 ntBASIC3.27□□□□□ -1.89
MSI1O43347 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AC099654.5-201ENST00000636479 350 ntBASIC3.27□□□□□ -1.89
MSI1O43347 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms