Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RNU6-1190P-201ENST00000410811 104 ntBASIC8.13□□□□□ -1.11
MSH5O43196 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC8.13□□□□□ -1.11
MSH5O43196 RPS12P2-201ENST00000439728 269 ntBASIC8.13□□□□□ -1.11
MSH5O43196 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC8.13□□□□□ -1.11
MSH5O43196 AP006245.2-201ENST00000522004 300 ntBASIC8.13□□□□□ -1.11
MSH5O43196 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC8.13□□□□□ -1.11
MSH5O43196 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
MSH5O43196 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC8.13□□□□□ -1.11
MSH5O43196 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
MSH5O43196 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
MSH5O43196 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
MSH5O43196 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
MSH5O43196 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC8.12□□□□□ -1.11
MSH5O43196 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC8.12□□□□□ -1.11
MSH5O43196 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.12□□□□□ -1.11
MSH5O43196 RNA5SP346-201ENST00000363541 121 ntBASIC8.12□□□□□ -1.11
MSH5O43196 MIR518F-201ENST00000384973 87 ntBASIC8.12□□□□□ -1.11
MSH5O43196 AC009804.1-201ENST00000400949 179 ntBASIC8.12□□□□□ -1.11
MSH5O43196 RNU6-380P-201ENST00000410207 107 ntBASIC8.12□□□□□ -1.11
MSH5O43196 AC064862.4-201ENST00000442180 334 ntBASIC8.12□□□□□ -1.11
MSH5O43196 RN7SL610P-201ENST00000463845 291 ntBASIC8.12□□□□□ -1.11
MSH5O43196 AC092754.1-201ENST00000472975 479 ntBASIC8.12□□□□□ -1.11
MSH5O43196 KHDC1P1-201ENST00000511053 508 ntBASIC8.12□□□□□ -1.11
MSH5O43196 RNA5SP362-201ENST00000516048 118 ntBASIC8.12□□□□□ -1.11
MSH5O43196 RNU7-153P-201ENST00000516455 62 ntBASIC8.12□□□□□ -1.11
MSH5O43196 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC8.12□□□□□ -1.11
MSH5O43196 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC8.12□□□□□ -1.11
MSH5O43196 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
MSH5O43196 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
MSH5O43196 AC020658.2-201ENST00000559030 4020 ntBASIC8.12□□□□□ -1.11
MSH5O43196 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
MSH5O43196 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
MSH5O43196 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
MSH5O43196 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
MSH5O43196 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
MSH5O43196 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MSH5O43196 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
MSH5O43196 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC8.11□□□□□ -1.11
MSH5O43196 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
MSH5O43196 AC063976.3-201ENST00000426849 329 ntBASIC8.11□□□□□ -1.11
MSH5O43196 AL354710.1-201ENST00000453641 246 ntBASIC8.11□□□□□ -1.11
MSH5O43196 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC8.11□□□□□ -1.11
MSH5O43196 IGKV2-18-201ENST00000522607 343 ntBASIC8.11□□□□□ -1.11
MSH5O43196 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC8.11□□□□□ -1.11
MSH5O43196 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC8.11□□□□□ -1.11
MSH5O43196 AL512310.12-203ENST00000640543 90 ntBASIC8.11□□□□□ -1.11
MSH5O43196 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.11□□□□□ -1.11
MSH5O43196 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
MSH5O43196 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
MSH5O43196 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
MSH5O43196 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MSH5O43196 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
MSH5O43196 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC8.11□□□□□ -1.11
MSH5O43196 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
MSH5O43196 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC8.1□□□□□ -1.11
MSH5O43196 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC8.1□□□□□ -1.11
MSH5O43196 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.1□□□□□ -1.11
MSH5O43196 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
MSH5O43196 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MSH5O43196 MIRLET7A1-201ENST00000362295 80 ntBASIC8.1□□□□□ -1.11
MSH5O43196 SNORD16-201ENST00000362803 99 ntBASIC8.1□□□□□ -1.11
MSH5O43196 RNU6-743P-201ENST00000364151 106 ntBASIC8.1□□□□□ -1.11
MSH5O43196 SNRPGP13-201ENST00000442212 177 ntBASIC8.1□□□□□ -1.11
MSH5O43196 IGHV5-78-201ENST00000450948 295 ntBASIC8.1□□□□□ -1.11
MSH5O43196 RN7SL714P-201ENST00000487050 298 ntBASIC8.1□□□□□ -1.11
MSH5O43196 AIG1P1-201ENST00000503376 148 ntBASIC8.1□□□□□ -1.11
MSH5O43196 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC8.1□□□□□ -1.11
MSH5O43196 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
MSH5O43196 HNRNPDLP4-201ENST00000605144 301 ntBASIC8.1□□□□□ -1.11
MSH5O43196 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
MSH5O43196 AP005431.1-201ENST00000618479 319 ntBASIC8.1□□□□□ -1.11
MSH5O43196 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MSH5O43196 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MSH5O43196 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC8.1□□□□□ -1.11
MSH5O43196 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
MSH5O43196 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
MSH5O43196 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MSH5O43196 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC8.09□□□□□ -1.11
MSH5O43196 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
MSH5O43196 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MSH5O43196 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MSH5O43196 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
MSH5O43196 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
MSH5O43196 RNU6-178P-201ENST00000384631 104 ntBASIC8.09□□□□□ -1.11
MSH5O43196 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC8.09□□□□□ -1.11
MSH5O43196 AC012308.1-201ENST00000451232 178 ntBASIC8.09□□□□□ -1.11
MSH5O43196 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC8.09□□□□□ -1.11
MSH5O43196 Y_RNA.681-201ENST00000516445 113 ntBASIC8.09□□□□□ -1.11
MSH5O43196 RNA5SP291-201ENST00000517222 105 ntBASIC8.09□□□□□ -1.11
MSH5O43196 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC8.09□□□□□ -1.11
MSH5O43196 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
MSH5O43196 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
MSH5O43196 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC8.09□□□□□ -1.11
MSH5O43196 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC8.08□□□□□ -1.12
MSH5O43196 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
MSH5O43196 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
MSH5O43196 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC8.08□□□□□ -1.12
MSH5O43196 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
MSH5O43196 RNU4-16P-201ENST00000364737 141 ntBASIC8.08□□□□□ -1.12
MSH5O43196 SNORA14A-201ENST00000364773 135 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms