Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 HMGN2P13-201ENST00000476476 274 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 MTND3P22-201ENST00000510932 243 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 Y_RNA.682-201ENST00000516457 100 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 AC105029.1-201ENST00000520250 669 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 MIR3186-201ENST00000577404 85 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 OR1M4P-201ENST00000589199 287 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 AC123912.5-201ENST00000605470 343 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 AC104237.2-201ENST00000612456 443 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PHGDHO43175 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PHGDHO43175 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.5□□□□□ -1.85
PHGDHO43175 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PHGDHO43175 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
PHGDHO43175 MTND4P29-201ENST00000503122 1372 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.5□□□□□ -1.85
PHGDHO43175 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PHGDHO43175 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PHGDHO43175 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PHGDHO43175 SNORD9-201ENST00000362566 104 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-37P-201ENST00000362692 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 Y_RNA.61-201ENST00000362835 102 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 Y_RNA.212-201ENST00000364177 102 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-11P-201ENST00000364234 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNA5SP515-201ENST00000364570 118 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-7-201ENST00000364784 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNA5SP479-201ENST00000364858 117 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-8-201ENST00000365467 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-898P-201ENST00000365627 104 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AP002088.1-201ENST00000382740 395 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-25P-201ENST00000383873 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-1-201ENST00000383898 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-214P-201ENST00000384130 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-48P-201ENST00000384161 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-36P-201ENST00000384172 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-4P-201ENST00000384205 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-5P-201ENST00000384238 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-3P-201ENST00000384314 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-16P-201ENST00000384385 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-15P-201ENST00000384534 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-2-201ENST00000384627 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-29P-201ENST00000384637 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-9-201ENST00000384776 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-33P-201ENST00000384793 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AC007390.1-201ENST00000415722 356 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AC016831.2-201ENST00000417179 352 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.49□□□□□ -1.85
PHGDHO43175 NCOR1P3-201ENST00000420479 303 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 CYCSP32-201ENST00000440548 321 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AL031183.1-201ENST00000457667 207 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RN7SL594P-201ENST00000470590 287 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PHGDHO43175 RPS4XP22-201ENST00000480755 780 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.49□□□□□ -1.85
PHGDHO43175 AC026801.1-201ENST00000497178 464 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PHGDHO43175 HMGN1P11-201ENST00000508668 303 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-566P-201ENST00000516790 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-711P-201ENST00000517255 106 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.49□□□□□ -1.85
PHGDHO43175 AC011611.1-201ENST00000552179 197 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.49□□□□□ -1.85
PHGDHO43175 AC138761.3-201ENST00000579993 334 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.49□□□□□ -1.85
PHGDHO43175 AC023043.2-201ENST00000589678 1026 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.49□□□□□ -1.85
PHGDHO43175 AC087045.1-201ENST00000605856 382 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 RNU6-6P-201ENST00000606623 107 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AL138726.1-201ENST00000614873 333 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AP003355.3-201ENST00000623465 114 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 Z69720.2-201ENST00000624755 279 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 AL359697.1-201ENST00000624879 587 ntBASIC3.49□□□□□ -1.85
PHGDHO43175 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
PHGDHO43175 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.49□□□□□ -1.85
PHGDHO43175 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PHGDHO43175 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PHGDHO43175 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
PHGDHO43175 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PHGDHO43175 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PHGDHO43175 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PHGDHO43175 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PHGDHO43175 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PHGDHO43175 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PHGDHO43175 SNORD73A-201ENST00000386062 65 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.48□□□□□ -1.85
PHGDHO43175 RNA5SP31-201ENST00000411144 127 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.48□□□□□ -1.85
PHGDHO43175 AL139396.1-201ENST00000421137 167 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 BPY2DP-201ENST00000422208 265 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 AC005300.1-201ENST00000428401 373 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.48□□□□□ -1.85
PHGDHO43175 AL714022.1-201ENST00000439897 151 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 AC098831.1-201ENST00000440661 216 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 RPL32P28-201ENST00000443577 397 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 AL357552.1-201ENST00000445254 415 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.48□□□□□ -1.85
PHGDHO43175 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
PHGDHO43175 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.48□□□□□ -1.85
PHGDHO43175 RPS3AP46-201ENST00000448352 682 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms