Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC022447.1-201ENST00000515358 464 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 RNA5SP24-201ENST00000516478 95 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.4□□□□□ -1.87
NPHP1O15259 MTCYBP20-201ENST00000524239 1129 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.4□□□□□ -1.87
NPHP1O15259 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.4□□□□□ -1.87
NPHP1O15259 AC008521.1-201ENST00000587471 187 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 AC098848.2-201ENST00000588023 330 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 AC078899.3-201ENST00000599065 212 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 AC025034.2-201ENST00000623264 286 ntBASIC3.4□□□□□ -1.87
NPHP1O15259 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.4□□□□□ -1.87
NPHP1O15259 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 AC004520.1-201ENST00000608362 1413 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPHP1O15259 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPHP1O15259 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPHP1O15259 RNU6-179P-201ENST00000363350 107 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 SNORD56.5-201ENST00000364281 72 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 Y_RNA.367-201ENST00000365544 101 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 RNU6-108P-201ENST00000365558 107 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 XGY1-201ENST00000381172 446 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 AL356057.2-201ENST00000403318 432 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.39□□□□□ -1.87
NPHP1O15259 AL031779.1-201ENST00000415663 330 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.39□□□□□ -1.87
NPHP1O15259 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.39□□□□□ -1.87
NPHP1O15259 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.39□□□□□ -1.87
NPHP1O15259 AC010095.1-201ENST00000443543 144 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 AC079781.2-201ENST00000446424 169 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 AC079448.1-201ENST00000449377 373 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 RPL21P41-201ENST00000459863 264 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 AP004217.1-201ENST00000480579 346 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.39□□□□□ -1.87
NPHP1O15259 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.39□□□□□ -1.87
NPHP1O15259 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.39□□□□□ -1.87
NPHP1O15259 SNORA31.6-201ENST00000516241 130 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.39□□□□□ -1.87
NPHP1O15259 AP000873.5-201ENST00000533906 236 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.39□□□□□ -1.87
NPHP1O15259 AC109347.2-201ENST00000610220 349 ntBASIC3.39□□□□□ -1.87
NPHP1O15259 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP1O15259 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP1O15259 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP1O15259 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP1O15259 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NPHP1O15259 U8.9-201ENST00000365667 134 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 SNORA75-201ENST00000384158 137 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 AL356057.3-201ENST00000402607 340 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 RNU6-1328P-201ENST00000410938 106 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHP1O15259 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.38□□□□□ -1.87
NPHP1O15259 PIGFP2-201ENST00000421400 651 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.38□□□□□ -1.87
NPHP1O15259 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHP1O15259 AC093151.1-201ENST00000427711 313 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.38□□□□□ -1.87
NPHP1O15259 AC092001.1-201ENST00000453012 261 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 RPS3P1-201ENST00000456781 192 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 RPL31P3-201ENST00000458430 332 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 AC022493.1-201ENST00000492984 337 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHP1O15259 AC117532.1-201ENST00000514638 323 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 RNU6-581P-201ENST00000516214 105 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 RN7SKP40-201ENST00000517211 242 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 RPL7P20-201ENST00000520308 745 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.38□□□□□ -1.87
NPHP1O15259 COX6CP5-201ENST00000527162 228 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHP1O15259 LINC00933-203ENST00000559812 219 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.38□□□□□ -1.87
NPHP1O15259 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHP1O15259 AC119751.7-201ENST00000600494 245 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 AC135507.1-201ENST00000607214 561 ntBASIC3.38□□□□□ -1.87
NPHP1O15259 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.38□□□□□ -1.87
NPHP1O15259 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP1O15259 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NPHP1O15259 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.38□□□□□ -1.87
NPHP1O15259 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPHP1O15259 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPHP1O15259 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.37□□□□□ -1.87
NPHP1O15259 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.37□□□□□ -1.87
NPHP1O15259 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.37□□□□□ -1.87
NPHP1O15259 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPHP1O15259 MIR26A1-201ENST00000362205 77 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 SNORD62.1-201ENST00000362541 86 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP1O15259 SNORD116-9-201ENST00000384000 95 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 RNU6-74P-201ENST00000384235 107 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 SNORD116-3-201ENST00000384287 95 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 SNORD116-7-201ENST00000384404 95 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 SNORD116-5-201ENST00000384462 95 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 Y_RNA.553-201ENST00000384670 102 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 MIR518D-201ENST00000385014 87 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 MIR181B1-201ENST00000385240 110 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 SNORA26.7-201ENST00000391288 122 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 RPL7P10-201ENST00000417407 739 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP1O15259 MTCO2P16-201ENST00000436962 677 ntBASIC3.37□□□□□ -1.87
NPHP1O15259 FAM92A1P2-202ENST00000504766 877 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms