Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC006026.1-201ENST00000444025 1803 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FOXN3O00409 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FOXN3O00409 RNU1-75P-201ENST00000347264 129 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 Y_RNA.263-201ENST00000364659 114 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.58□□□□□ -1.84
FOXN3O00409 SNORA32.2-201ENST00000384049 122 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 RNU6-198P-201ENST00000384258 104 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 Y_RNA.509-201ENST00000384506 99 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 Y_RNA.535-201ENST00000384612 99 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXN3O00409 RNU4-26P-201ENST00000410270 107 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.58□□□□□ -1.84
FOXN3O00409 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.58□□□□□ -1.84
FOXN3O00409 AL590639.1-201ENST00000456484 337 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 AC104472.2-201ENST00000469035 601 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 RPS4XP22-201ENST00000480755 780 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 AC083904.1-201ENST00000487828 231 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.58□□□□□ -1.84
FOXN3O00409 AC104136.1-201ENST00000512969 394 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 RNU2-69P-201ENST00000516061 100 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.58□□□□□ -1.84
FOXN3O00409 AP000763.2-201ENST00000540641 163 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.58□□□□□ -1.84
FOXN3O00409 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.58□□□□□ -1.84
FOXN3O00409 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.58□□□□□ -1.84
FOXN3O00409 AC092807.2-201ENST00000609367 243 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXN3O00409 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXN3O00409 AC022336.2-201ENST00000568966 2538 ntBASIC3.58□□□□□ -1.84
FOXN3O00409 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
FOXN3O00409 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXN3O00409 Y_RNA.142-201ENST00000363491 102 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXN3O00409 MIR490-201ENST00000384865 128 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXN3O00409 PTMAP2-201ENST00000397627 327 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 RPS29P4-201ENST00000414733 161 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 PDCL2P1-201ENST00000419302 352 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.57□□□□□ -1.84
FOXN3O00409 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.57□□□□□ -1.84
FOXN3O00409 AL353678.1-201ENST00000422735 741 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.57□□□□□ -1.84
FOXN3O00409 HMGN2P31-201ENST00000432430 273 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.57□□□□□ -1.84
FOXN3O00409 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 RPL37P4-201ENST00000448908 268 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 RPL21P93-201ENST00000480465 489 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 AC093663.1-201ENST00000497190 394 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 AC010486.1-201ENST00000511793 424 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 SNORA67.7-201ENST00000516664 135 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.57□□□□□ -1.84
FOXN3O00409 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.57□□□□□ -1.84
FOXN3O00409 AC243972.3-201ENST00000539655 198 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 AC093027.1-201ENST00000546698 429 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 TRAV37-201ENST00000553906 342 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 AL391261.3-201ENST00000557194 520 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 RPS3AP23-202ENST00000574601 686 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 MIR4795-201ENST00000584182 89 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 HMGN2P15-201ENST00000585707 270 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 Z82243.1-201ENST00000609432 473 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 AC006133.1-201ENST00000617106 264 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.57□□□□□ -1.84
FOXN3O00409 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 AC090617.10-201ENST00000624308 134 ntBASIC3.57□□□□□ -1.84
FOXN3O00409 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXN3O00409 FAM35CP-201ENST00000554755 2470 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
FOXN3O00409 RNU1-70P-201ENST00000362618 164 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 Y_RNA.157-201ENST00000363638 102 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
FOXN3O00409 RNU1-73P-201ENST00000383971 164 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 RNU6-767P-201ENST00000384132 107 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 RNU6-1011P-201ENST00000384668 107 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 MIR514A2-201ENST00000385131 88 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 MIR514A3-201ENST00000385132 88 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 MT-TD-201ENST00000387419 68 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 MIR888-201ENST00000401186 77 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 AL162578.1-201ENST00000406202 378 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.56□□□□□ -1.84
FOXN3O00409 PGBD4P6-201ENST00000421501 610 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 SKA2P1-201ENST00000425592 390 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 AC098614.2-201ENST00000426040 255 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 AL078601.1-201ENST00000444542 271 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 HMGN1P18-201ENST00000457642 277 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 DYNLL1P5-201ENST00000467158 270 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 RN7SL442P-201ENST00000473804 320 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 RPL21P13-201ENST00000488305 481 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 AC008716.1-201ENST00000511084 513 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.56□□□□□ -1.84
FOXN3O00409 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.56□□□□□ -1.84
FOXN3O00409 BTF3P12-201ENST00000519620 469 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.56□□□□□ -1.84
FOXN3O00409 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.56□□□□□ -1.84
FOXN3O00409 MIR4782-201ENST00000577987 79 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 MIR3158-1-201ENST00000583596 81 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 AC018638.8-201ENST00000588755 281 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 BNIP3P22-201ENST00000593399 556 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 AC005261.5-201ENST00000596280 355 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms