Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 EDDM3CP-201ENST00000415977 425 ntBASIC1.77□□□□□ -2.13
DFFAO00273 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.77□□□□□ -2.13
DFFAO00273 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.77□□□□□ -2.13
DFFAO00273 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.77□□□□□ -2.13
DFFAO00273 AC108059.3-201ENST00000456388 214 ntBASIC1.77□□□□□ -2.13
DFFAO00273 FAM92A1P2-202ENST00000504766 877 ntBASIC1.77□□□□□ -2.13
DFFAO00273 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.77□□□□□ -2.13
DFFAO00273 MRPS17P9-201ENST00000511924 393 ntBASIC1.77□□□□□ -2.13
DFFAO00273 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.77□□□□□ -2.13
DFFAO00273 ACA59.2-201ENST00000517061 156 ntBASIC1.77□□□□□ -2.13
DFFAO00273 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.77□□□□□ -2.13
DFFAO00273 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.77□□□□□ -2.13
DFFAO00273 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.77□□□□□ -2.13
DFFAO00273 AP000907.2-201ENST00000530827 353 ntBASIC1.77□□□□□ -2.13
DFFAO00273 AC024614.2-201ENST00000577584 372 ntBASIC1.77□□□□□ -2.13
DFFAO00273 AC012493.3-201ENST00000604494 112 ntBASIC1.77□□□□□ -2.13
DFFAO00273 AC097468.3-201ENST00000607956 456 ntBASIC1.77□□□□□ -2.13
DFFAO00273 AC072039.2-201ENST00000608883 439 ntBASIC1.77□□□□□ -2.13
DFFAO00273 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.77□□□□□ -2.13
DFFAO00273 AC090970.3-201ENST00000612566 866 ntBASIC1.77□□□□□ -2.13
DFFAO00273 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
DFFAO00273 MIR5739-201ENST00000619803 80 ntBASIC1.77□□□□□ -2.13
DFFAO00273 AL354685.2-201ENST00000448218 1447 ntBASIC1.76□□□□□ -2.13
DFFAO00273 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.76□□□□□ -2.13
DFFAO00273 RNU6-701P-201ENST00000384059 107 ntBASIC1.76□□□□□ -2.13
DFFAO00273 MIR1302-8-201ENST00000408342 128 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AL353621.1-201ENST00000418219 243 ntBASIC1.76□□□□□ -2.13
DFFAO00273 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.76□□□□□ -2.13
DFFAO00273 AL592045.1-201ENST00000429867 352 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.76□□□□□ -2.13
DFFAO00273 RPL7P34-201ENST00000433316 712 ntBASIC1.76□□□□□ -2.13
DFFAO00273 LARP1BP3-201ENST00000437229 869 ntBASIC1.76□□□□□ -2.13
DFFAO00273 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.76□□□□□ -2.13
DFFAO00273 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.76□□□□□ -2.13
DFFAO00273 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.76□□□□□ -2.13
DFFAO00273 AC117503.1-201ENST00000472241 394 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AC011005.2-201ENST00000487324 359 ntBASIC1.76□□□□□ -2.13
DFFAO00273 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AC116655.1-201ENST00000508324 901 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.76□□□□□ -2.13
DFFAO00273 RNU2-44P-201ENST00000516795 194 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AC084851.1-201ENST00000529105 249 ntBASIC1.76□□□□□ -2.13
DFFAO00273 RPS3AP4-201ENST00000555161 764 ntBASIC1.76□□□□□ -2.13
DFFAO00273 DUXAP1-201ENST00000556632 463 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.76□□□□□ -2.13
DFFAO00273 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.76□□□□□ -2.13
DFFAO00273 AC012213.3-201ENST00000577199 777 ntBASIC1.76□□□□□ -2.13
DFFAO00273 MIR4782-201ENST00000577987 79 ntBASIC1.76□□□□□ -2.13
DFFAO00273 MIR4529-201ENST00000578110 78 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AL358072.1-201ENST00000604156 575 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AC025811.1-201ENST00000604312 472 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AL355297.2-201ENST00000604792 129 ntBASIC1.76□□□□□ -2.13
DFFAO00273 BCRP9-201ENST00000605312 388 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AC080013.3-201ENST00000606839 578 ntBASIC1.76□□□□□ -2.13
DFFAO00273 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.76□□□□□ -2.13
DFFAO00273 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.76□□□□□ -2.13
DFFAO00273 AC138627.2-201ENST00000624202 601 ntBASIC1.76□□□□□ -2.13
DFFAO00273 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
DFFAO00273 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
DFFAO00273 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
DFFAO00273 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.75□□□□□ -2.13
DFFAO00273 RNU6-1280P-201ENST00000365211 107 ntBASIC1.75□□□□□ -2.13
DFFAO00273 RNA5SP240-201ENST00000365355 128 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.75□□□□□ -2.13
DFFAO00273 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
DFFAO00273 RNU6-723P-201ENST00000383973 107 ntBASIC1.75□□□□□ -2.13
DFFAO00273 RNU6-769P-201ENST00000384407 104 ntBASIC1.75□□□□□ -2.13
DFFAO00273 RNU6-817P-201ENST00000391083 104 ntBASIC1.75□□□□□ -2.13
DFFAO00273 VPS26BP1-201ENST00000417155 755 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.75□□□□□ -2.13
DFFAO00273 AL353706.1-201ENST00000436728 494 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AC009238.1-201ENST00000442165 424 ntBASIC1.75□□□□□ -2.13
DFFAO00273 NEFMP1-201ENST00000443423 1006 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AC009237.6-201ENST00000446969 424 ntBASIC1.75□□□□□ -2.13
DFFAO00273 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.75□□□□□ -2.13
DFFAO00273 PMCHL2-203ENST00000457791 237 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AC112771.1-201ENST00000463581 102 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AC107032.1-201ENST00000485945 480 ntBASIC1.75□□□□□ -2.13
DFFAO00273 RPL39P36-201ENST00000490784 156 ntBASIC1.75□□□□□ -2.13
DFFAO00273 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.75□□□□□ -2.13
DFFAO00273 CKS1BP2-201ENST00000497342 240 ntBASIC1.75□□□□□ -2.13
DFFAO00273 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
DFFAO00273 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.75□□□□□ -2.13
DFFAO00273 AC009902.1-201ENST00000519351 183 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AC068587.4-201ENST00000533893 186 ntBASIC1.75□□□□□ -2.13
DFFAO00273 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
DFFAO00273 AC079598.5-201ENST00000547460 117 ntBASIC1.75□□□□□ -2.13
DFFAO00273 MTCYBP23-201ENST00000558717 1102 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AC104581.2-201ENST00000572227 430 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AC136618.2-201ENST00000575091 400 ntBASIC1.75□□□□□ -2.13
DFFAO00273 MIR3126-201ENST00000577443 74 ntBASIC1.75□□□□□ -2.13
DFFAO00273 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
DFFAO00273 MIR544B-201ENST00000582372 78 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AC078899.2-201ENST00000595282 212 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AC104763.2-201ENST00000604179 382 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AL592221.1-201ENST00000605266 382 ntBASIC1.75□□□□□ -2.13
DFFAO00273 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.75□□□□□ -2.13
DFFAO00273 AL355472.4-201ENST00000610233 626 ntBASIC1.75□□□□□ -2.13
DFFAO00273 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.75□□□□□ -2.13
DFFAO00273 AC002543.1-201ENST00000299783 1954 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms