Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC53A6NM62 AL360271.2-201ENST00000447710 161 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 SNRPFP3-201ENST00000457792 225 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRC53A6NM62 AC112206.3-201ENST00000514578 389 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 RNU6-1178P-201ENST00000516674 107 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC53A6NM62 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC53A6NM62 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC53A6NM62 DNAJC8P1-201ENST00000554535 372 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 MIR4429-201ENST00000580105 73 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 MIR5583-1-201ENST00000580941 59 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 AC090517.2-201ENST00000614966 680 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 AL161431.1-201ENST00000618966 4205 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRC53A6NM62 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.07□□□□□ -1.92
LRRC53A6NM62 AC092593.1-201ENST00000515413 1815 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LRRC53A6NM62 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRRC53A6NM62 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
LRRC53A6NM62 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.06□□□□□ -1.92
LRRC53A6NM62 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.06□□□□□ -1.92
LRRC53A6NM62 Y_RNA.9-201ENST00000362354 101 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 RNU6-715P-201ENST00000365204 103 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 Y_RNA.450-201ENST00000384198 113 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 SNORD115-47-201ENST00000391226 86 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 SNORA40C-201ENST00000391285 128 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 RNA5SP344-201ENST00000411081 104 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 NDUFS5P4-201ENST00000412983 318 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 BPY2DP-201ENST00000422208 265 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 MTCO1P20-201ENST00000425366 358 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 AL365496.1-201ENST00000426885 215 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC007560.1-201ENST00000426912 237 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 UBE2V1P8-201ENST00000437166 265 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 ELF2P3-201ENST00000445099 1506 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 MTATP6P7-201ENST00000453315 681 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 RNU7-180P-201ENST00000459240 63 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 AL121769.1-201ENST00000469473 401 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC114786.4-201ENST00000508771 728 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 RNU6-718P-201ENST00000516166 105 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 RNU6-1183P-201ENST00000517054 60 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 AL157687.1-201ENST00000554853 619 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.06□□□□□ -1.92
LRRC53A6NM62 AL355598.1-201ENST00000604169 202 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC005046.1-201ENST00000608515 625 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 AC084757.4-201ENST00000616350 526 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 YWHAEP7-203ENST00000622054 312 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 MIR6733-201ENST00000635723 61 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 MIR1321-201ENST00000637766 79 ntBASIC3.06□□□□□ -1.92
LRRC53A6NM62 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LRRC53A6NM62 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 RNU6-799P-201ENST00000363567 107 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 RNA5SP139-201ENST00000364340 117 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 Y_RNA.402-201ENST00000383972 102 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 RNU6-166P-201ENST00000384371 107 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 RNU6-1127P-201ENST00000384580 107 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 RNU6-1179P-201ENST00000384667 107 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 AL031121.1-201ENST00000406553 254 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 RNU6-648P-201ENST00000410190 107 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 AC023141.4-201ENST00000412031 328 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 USP9YP27-201ENST00000418455 438 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 RPS3AP44-201ENST00000425466 790 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 USP9YP18-201ENST00000425912 695 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 AL669831.1-202ENST00000428504 417 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 GTF2IP20-201ENST00000431663 360 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 GTF2IP13-201ENST00000438487 386 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 AL583843.1-201ENST00000456070 346 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 AC092798.1-201ENST00000458542 409 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 TRBV1-201ENST00000476502 284 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 AC073539.2-201ENST00000597113 165 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms