Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
TRIM49BA6NDI0 RNU6-884P-201ENST00000363889 107 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 SNORA41-201ENST00000384675 132 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 RPL23AP32-201ENST00000395315 459 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 CALM2P3-201ENST00000400429 449 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 MTND3P17-201ENST00000416968 344 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AL353193.1-201ENST00000421444 268 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 RPS15AP5-201ENST00000436276 388 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC073614.1-201ENST00000438690 650 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC005094.1-201ENST00000440420 368 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 USP9YP15-201ENST00000442391 422 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 C1DP4-201ENST00000455429 424 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 RPL12P25-201ENST00000455592 494 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC013267.1-201ENST00000458227 267 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 RNA5SP148-201ENST00000516527 94 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 OR5BN1P-201ENST00000532955 829 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AK6P1-201ENST00000540219 478 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC068790.2-201ENST00000602601 557 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC121334.2-201ENST00000605387 271 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC004908.2-201ENST00000609090 574 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC087241.4-201ENST00000612441 480 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AL136360.1-201ENST00000503377 1900 ntBASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM49BA6NDI0 AC027514.1-201ENST00000588561 1603 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AC135776.4-201ENST00000624300 1904 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 Y_RNA.22-201ENST00000362492 102 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 Y_RNA.159-201ENST00000363674 87 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 RNA5SP68-201ENST00000363885 119 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 RNU6-169P-201ENST00000365336 107 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 Y_RNA.582-201ENST00000391023 95 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AL359511.1-201ENST00000402970 211 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AL513475.1-201ENST00000406602 315 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 UBE2V1P10-201ENST00000414685 269 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 MTCO2P11-201ENST00000431069 680 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 DPPA3P1-201ENST00000448050 469 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AC027673.1-201ENST00000456245 405 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 RPL37P6-201ENST00000460682 294 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 SRRM1P2-201ENST00000464531 1192 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 RN7SL432P-201ENST00000484057 298 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AIG1P1-201ENST00000503376 148 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 FAM92A1P1-201ENST00000528023 890 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 DEFB108A-201ENST00000530110 222 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 MIR3616-201ENST00000584070 92 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AC080078.2-201ENST00000603766 501 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AL121992.2-201ENST00000606262 256 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AC122108.2-201ENST00000611946 526 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 MIR6817-201ENST00000615588 66 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 uc_338.12-201ENST00000616344 181 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 U4.3-201ENST00000621047 82 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 AC099654.12-201ENST00000639868 649 ntBASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
TRIM49BA6NDI0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 RNU6-181P-201ENST00000363225 107 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 RNU6-461P-201ENST00000364195 107 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 Y_RNA.245-201ENST00000364493 95 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 SNORA20.2-201ENST00000383922 131 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 MIR1-2-201ENST00000384961 85 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 RPL21P24-201ENST00000413752 448 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC009963.1-201ENST00000417265 157 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC010631.1-201ENST00000474150 156 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC108078.1-201ENST00000508073 725 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms