Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RNF138P1-201ENST00000502765 546 ntBASIC0.53□□□□□ -2.32
CNOT1A5YKK6 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.53□□□□□ -2.32
CNOT1A5YKK6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.53□□□□□ -2.32
CNOT1A5YKK6 AC090888.1-201ENST00000561335 1141 ntBASIC0.53□□□□□ -2.32
CNOT1A5YKK6 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CNOT1A5YKK6 AL391516.1-201ENST00000554380 2449 ntBASIC0.53□□□□□ -2.32
CNOT1A5YKK6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.53□□□□□ -2.33
CNOT1A5YKK6 RNA5SP258-201ENST00000362750 119 ntBASIC0.53□□□□□ -2.33
CNOT1A5YKK6 RNU4-23P-201ENST00000362839 140 ntBASIC0.53□□□□□ -2.33
CNOT1A5YKK6 Y_RNA.62-201ENST00000362840 99 ntBASIC0.53□□□□□ -2.33
CNOT1A5YKK6 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
CNOT1A5YKK6 AC244453.4-201ENST00000419150 388 ntBASIC0.53□□□□□ -2.33
CNOT1A5YKK6 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.33
CNOT1A5YKK6 AC246680.2-201ENST00000422106 389 ntBASIC0.53□□□□□ -2.33
CNOT1A5YKK6 MTND5P15-201ENST00000434246 349 ntBASIC0.53□□□□□ -2.33
CNOT1A5YKK6 AC104692.1-201ENST00000472406 90 ntBASIC0.53□□□□□ -2.33
CNOT1A5YKK6 RNU4-77P-201ENST00000516692 156 ntBASIC0.53□□□□□ -2.33
CNOT1A5YKK6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.53□□□□□ -2.33
CNOT1A5YKK6 HMGB1P14-201ENST00000557424 591 ntBASIC0.53□□□□□ -2.33
CNOT1A5YKK6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.53□□□□□ -2.33
CNOT1A5YKK6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
CNOT1A5YKK6 BTF3L4P2-201ENST00000392798 346 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 RNU6-712P-201ENST00000410558 100 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 OFD1P18Y-201ENST00000420889 959 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 MTND2P19-201ENST00000449129 1012 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.52□□□□□ -2.33
CNOT1A5YKK6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.52□□□□□ -2.33
CNOT1A5YKK6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.52□□□□□ -2.33
CNOT1A5YKK6 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.52□□□□□ -2.33
CNOT1A5YKK6 DUSP12P1-201ENST00000612874 516 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 MIR6130-201ENST00000619419 109 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 RNU6-1251P-201ENST00000364502 107 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 MRPL35P3-201ENST00000421557 364 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.52□□□□□ -2.33
CNOT1A5YKK6 RNU6-775P-201ENST00000459318 96 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.52□□□□□ -2.33
CNOT1A5YKK6 SNORA3.4-201ENST00000515969 96 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.52□□□□□ -2.33
CNOT1A5YKK6 AC007834.2-201ENST00000536310 343 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 AC002545.1-201ENST00000592511 181 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 SNRPGP17-201ENST00000603780 214 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 AC055876.5-201ENST00000605667 259 ntBASIC0.52□□□□□ -2.33
CNOT1A5YKK6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CNOT1A5YKK6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CNOT1A5YKK6 SNORA4.3-201ENST00000365564 137 ntBASIC0.51□□□□□ -2.33
CNOT1A5YKK6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.51□□□□□ -2.33
CNOT1A5YKK6 RNU6-1308P-201ENST00000516817 103 ntBASIC0.51□□□□□ -2.33
CNOT1A5YKK6 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.51□□□□□ -2.33
CNOT1A5YKK6 MTCYBP27-201ENST00000555160 670 ntBASIC0.51□□□□□ -2.33
CNOT1A5YKK6 AC136932.1-201ENST00000574771 208 ntBASIC0.51□□□□□ -2.33
CNOT1A5YKK6 MIR4713-201ENST00000582691 75 ntBASIC0.51□□□□□ -2.33
CNOT1A5YKK6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.51□□□□□ -2.33
CNOT1A5YKK6 AP001269.3-201ENST00000588718 329 ntBASIC0.51□□□□□ -2.33
CNOT1A5YKK6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.51□□□□□ -2.33
CNOT1A5YKK6 AL136313.1-201ENST00000624804 202 ntBASIC0.51□□□□□ -2.33
CNOT1A5YKK6 AP003485.1-201ENST00000625093 753 ntBASIC0.51□□□□□ -2.33
CNOT1A5YKK6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CNOT1A5YKK6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CNOT1A5YKK6 SNORA22-201ENST00000383907 134 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 SNORA22C-201ENST00000384614 134 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 SNORA8.3-201ENST00000384679 139 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 MIR604-201ENST00000384880 94 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 RNU6-244P-201ENST00000391028 104 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 RPS24P7-201ENST00000416921 246 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.5□□□□□ -2.33
CNOT1A5YKK6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.5□□□□□ -2.33
CNOT1A5YKK6 AL714022.1-201ENST00000439897 151 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 AC116337.2-201ENST00000477662 156 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 RPS27P22-201ENST00000478056 241 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 MIR892C-201ENST00000516410 77 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 AC025857.1-201ENST00000525252 377 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 AC068276.1-201ENST00000605793 379 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 AC087045.1-201ENST00000605856 382 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.5□□□□□ -2.33
CNOT1A5YKK6 MIR146A-201ENST00000385201 99 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 RNU6-700P-201ENST00000391043 107 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 RPS15AP38-201ENST00000413110 372 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 VN1R42P-201ENST00000424651 344 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 AL096803.2-201ENST00000450032 677 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 HMGB1P35-201ENST00000503360 598 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 AC022447.1-201ENST00000515358 464 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 AP003484.1-201ENST00000530974 250 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.5□□□□□ -2.33
CNOT1A5YKK6 MIR4305-201ENST00000583252 102 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 ZNF92P3-201ENST00000596594 954 ntBASIC0.5□□□□□ -2.33
CNOT1A5YKK6 AL159152.1-201ENST00000635019 2587 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 RNU6-1164P-201ENST00000364428 107 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 Y_RNA.552-201ENST00000384665 112 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 RPL23AP32-201ENST00000395315 459 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AL589655.1-201ENST00000405398 482 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 U6atac.2-201ENST00000408644 118 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 RNU4-78P-201ENST00000410940 126 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 UBE2FP1-201ENST00000416536 447 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 FGF7P5-201ENST00000441829 291 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AL035666.1-201ENST00000446195 348 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 RNU6-496P-201ENST00000516145 99 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms