Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC011939.3-201ENST00000613686 466 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AL121890.5-201ENST00000620848 304 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AC091965.5-201ENST00000624785 342 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 RNU6-1164P-201ENST00000364428 107 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 RNU6-1032P-201ENST00000384100 107 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 AC127391.1-201ENST00000411737 98 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 MTCO2P20-201ENST00000437339 673 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 PRPS1P1-201ENST00000445305 876 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 VN1R10P-201ENST00000447106 875 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 MTND3P4-201ENST00000453537 303 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 CBX3P8-201ENST00000532412 525 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 AC002545.1-201ENST00000592511 181 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 AC008945.2-201ENST00000606056 604 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 AL158211.4-201ENST00000606988 584 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 AL590396.4-201ENST00000636779 956 ntBASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
TCRBV3S1A0A5B6 SNORD115-48-201ENST00000364764 76 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 RNU2-28P-201ENST00000410457 189 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AL353621.1-201ENST00000418219 243 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AC010153.1-201ENST00000432862 727 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 NANOGP2-201ENST00000435391 727 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 MTND1P28-201ENST00000435623 950 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AL353706.1-201ENST00000436728 494 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 RPL30P7-201ENST00000479312 323 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AC013828.1-201ENST00000481845 158 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 ARL2BPP4-201ENST00000506854 471 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 UBL5P1-201ENST00000507979 193 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 SNORA48.9-201ENST00000516419 162 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 RNU6-703P-201ENST00000516946 107 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AC012414.6-201ENST00000568241 401 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AC080078.3-201ENST00000605407 463 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AC091946.2-201ENST00000606105 291 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AL596245.1-201ENST00000618994 362 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 AL159972.1-201ENST00000625150 448 ntBASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
TCRBV3S1A0A5B6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 RNU4-51P-201ENST00000364206 140 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 MTCYBP38-201ENST00000417160 1123 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 BTF3P4-201ENST00000418852 495 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 RPS27P16-201ENST00000425758 201 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 MTCO1P44-201ENST00000441935 243 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 MTND2P6-201ENST00000455337 1030 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AC112771.1-201ENST00000463581 102 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 RPS26P55-201ENST00000471178 356 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 RNU6-678P-201ENST00000516832 109 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 RNA5SP290-201ENST00000517133 127 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AC012414.2-201ENST00000559474 187 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 SNORA77B-201ENST00000578179 125 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 CLIC4P2-201ENST00000601934 717 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AL355472.4-201ENST00000610233 626 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AC002550.2-201ENST00000621246 394 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AC138627.2-201ENST00000624202 601 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AC106730.3-201ENST00000624568 641 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 MIR4275-201ENST00000636486 87 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 AL138713.1-201ENST00000624026 2130 ntBASIC0.7□□□□□ -2.3
TCRBV3S1A0A5B6 MIR302D-201ENST00000362275 68 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 RNU6-1222P-201ENST00000384615 107 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 MTND4P24-201ENST00000424002 397 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms