Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 SNORD48-201ENST00000364953 64 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 Y_RNA.311-201ENST00000365068 96 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 RNA5SP190-201ENST00000365222 118 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 MIR518A2-201ENST00000384966 87 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AL033519.2-201ENST00000403958 392 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AL021407.1-201ENST00000404531 386 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 RPS20P15-201ENST00000412792 311 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 RPS25P9-201ENST00000435591 252 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 SNRPEP7-201ENST00000438350 220 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AL117351.1-201ENST00000438864 766 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 ELOCP30-201ENST00000447108 299 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 MTND1P16-201ENST00000465177 898 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC055855.1-201ENST00000489563 579 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC108210.2-201ENST00000503681 201 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC093012.1-202ENST00000549403 582 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 MIR4255-201ENST00000579351 72 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC009974.1-201ENST00000608881 455 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC245297.2-201ENST00000610119 565 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC108479.2-201ENST00000617314 601 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AL136313.1-201ENST00000624804 202 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AC006026.1-201ENST00000444025 1803 ntBASIC1.29□□□□□ -2.2
TRAV41A0A0B4J266 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-14P-201ENST00000384630 106 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 RNA5SP212-201ENST00000391223 107 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 RN7SKP101-201ENST00000411376 320 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC097463.2-201ENST00000421074 142 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AL160275.3-201ENST00000423876 471 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AL445669.1-201ENST00000426743 755 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 RPL7P34-201ENST00000433316 712 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 HSPE1P21-201ENST00000438283 308 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 MTND2P29-201ENST00000438595 412 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 MTCO1P53-201ENST00000441633 699 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AL161788.1-201ENST00000441805 169 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 RPL7P12-201ENST00000446719 750 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 SSXP1-201ENST00000453640 473 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC027575.1-201ENST00000481064 460 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 RPF2P2-201ENST00000504693 896 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC079395.1-201ENST00000510981 262 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-1183P-201ENST00000517054 60 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-64P-201ENST00000517119 105 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC084851.1-201ENST00000529105 249 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 BNIP3P23-201ENST00000599655 511 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 BNIP3P27-201ENST00000599991 412 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC091057.3-201ENST00000602684 733 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-1192P-201ENST00000612197 107 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-489P-201ENST00000618289 107 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 PCMTD1P7-201ENST00000634506 357 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 AC099654.9-201ENST00000637055 678 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 Z75746.1-201ENST00000440243 2080 ntBASIC1.28□□□□□ -2.2
TRAV41A0A0B4J266 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 RNU4-42P-201ENST00000364738 142 ntBASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 SNORD116-12-201ENST00000384468 92 ntBASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 RNU6-1257P-201ENST00000384625 110 ntBASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 MIR561-201ENST00000385216 97 ntBASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 MIR764-201ENST00000390811 85 ntBASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 MTCO1P17-201ENST00000411522 491 ntBASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 USP9YP33-201ENST00000412220 421 ntBASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 USP9YP35-201ENST00000435696 412 ntBASIC1.27□□□□□ -2.21
TRAV41A0A0B4J266 IFNA20P-201ENST00000436840 528 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms