Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNU4-82P-201ENST00000362443 140 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNU6-931P-201ENST00000363850 107 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNU5A-8P-201ENST00000364102 114 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 MIR561-201ENST00000385216 97 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 BTF3P7-201ENST00000407097 488 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNA5SP450-201ENST00000411206 102 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 PTENP1-201ENST00000447117 1215 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL118520.1-201ENST00000450770 291 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 FABP5P13-201ENST00000452144 328 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 HMGB1P35-201ENST00000503360 598 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 SNORA4.4-201ENST00000515921 135 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 SNORA25.11-201ENST00000515935 105 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 SCARNA16.3-201ENST00000516595 184 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 SNORA31.23-201ENST00000517219 133 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 DEFB108A-201ENST00000530110 222 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC012213.3-201ENST00000577199 777 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC009974.1-201ENST00000608881 455 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC022202.1-201ENST00000613515 211 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL773524.1-201ENST00000614065 229 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNU6-906P-201ENST00000384700 70 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 MIR95-201ENST00000385072 81 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 AL139397.2-201ENST00000404529 772 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 AL353621.1-201ENST00000418219 243 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 AL353706.1-201ENST00000436728 494 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 MTND6P13-201ENST00000443510 523 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 RPL32P28-201ENST00000443577 397 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 HIGD1AP2-201ENST00000446367 280 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC092001.1-201ENST00000453012 261 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC055855.1-201ENST00000489563 579 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 UBE2V1P12-201ENST00000503954 474 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 RNU6-581P-201ENST00000516214 105 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC233702.2-202ENST00000562547 291 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 AL158042.1-201ENST00000605338 460 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC104454.1-201ENST00000421341 1401 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.9□□□□□ -2.11
COMMD3-BMI1R4GMX3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 XGY1-201ENST00000381172 446 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 RNU6-769P-201ENST00000384407 104 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 PIGPP2-201ENST00000411569 458 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 MTCO2P21-201ENST00000419780 677 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 RPL7P36-201ENST00000444633 681 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 OR6C5P-201ENST00000452388 923 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 RPF2P2-201ENST00000504693 896 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 RNU6-64P-201ENST00000517119 105 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AP003122.3-201ENST00000526316 255 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AP005639.2-201ENST00000527592 928 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AP004247.1-201ENST00000531556 1289 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC097468.3-201ENST00000607956 456 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AP000484.1-201ENST00000620067 1252 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC012150.2-201ENST00000621300 544 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC092125.1-201ENST00000562568 1995 ntBASIC1.89□□□□□ -2.11
COMMD3-BMI1R4GMX3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.88□□□□□ -2.11
COMMD3-BMI1R4GMX3 MTND5P6-201ENST00000422338 1798 ntBASIC1.88□□□□□ -2.11
COMMD3-BMI1R4GMX3 RNU1-72P-201ENST00000362976 153 ntBASIC1.88□□□□□ -2.11
COMMD3-BMI1R4GMX3 SNORA25B-201ENST00000365507 128 ntBASIC1.88□□□□□ -2.11
COMMD3-BMI1R4GMX3 RNA5SP88-201ENST00000365560 109 ntBASIC1.88□□□□□ -2.11
COMMD3-BMI1R4GMX3 RNU6-157P-201ENST00000383957 107 ntBASIC1.88□□□□□ -2.11
COMMD3-BMI1R4GMX3 RNU6-925P-201ENST00000384629 104 ntBASIC1.88□□□□□ -2.11
COMMD3-BMI1R4GMX3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COMMD3-BMI1R4GMX3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.88□□□□□ -2.11
COMMD3-BMI1R4GMX3 AL354692.1-201ENST00000423044 315 ntBASIC1.88□□□□□ -2.11
COMMD3-BMI1R4GMX3 HSFY7P-201ENST00000432672 318 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms