Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
PCDHGA1Q9Y5H4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
PCDHGA1Q9Y5H4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU6-195P-201ENST00000411352 109 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 MED13P1-201ENST00000428342 171 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 MYL8P-204ENST00000431574 518 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 MICF-203ENST00000432679 129 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AL353706.1-201ENST00000436728 494 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 RPS24P1-201ENST00000438550 371 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AC244505.5-201ENST00000443639 207 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 MTND1P27-201ENST00000451117 902 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU6-956P-201ENST00000458868 103 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 ARL2BPP4-201ENST00000506854 471 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU6-237P-201ENST00000515985 71 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU1-41P-201ENST00000516161 162 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU1-48P-201ENST00000516400 162 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 SNORA18.6-201ENST00000516792 115 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU6-1220P-201ENST00000517126 108 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AP000873.5-201ENST00000533906 236 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AC087883.1-201ENST00000551882 391 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AC024619.4-201ENST00000580924 316 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 PIGPP4-201ENST00000584447 307 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AC064872.1-201ENST00000604823 1072 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 uc_338.14-201ENST00000613162 166 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 LRRC77P-213ENST00000637727 880 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 AC092447.7-201ENST00000422212 1621 ntBASIC2.71□□□□□ -1.98
PCDHGA1Q9Y5H4 RNA5SP68-201ENST00000363885 119 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 HMGN2P35-201ENST00000412164 270 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 MTND3P17-201ENST00000416968 344 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 RPL36AP6-201ENST00000435770 321 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 MTCO2P16-201ENST00000436962 677 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 MTND2P22-201ENST00000444325 1033 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 AC003071.1-201ENST00000451219 789 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 RPS3P1-201ENST00000456781 192 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 AC093899.1-201ENST00000457984 376 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 GZMAP1-201ENST00000503054 631 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 AC093534.1-201ENST00000504977 132 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 AC096725.1-201ENST00000514266 313 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 RNA5SP76-201ENST00000516277 87 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 OR5B19P-201ENST00000531766 928 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 AC234778.2-201ENST00000566241 354 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 AC040904.1-201ENST00000590850 223 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 AL356280.1-201ENST00000603614 379 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 AP000787.2-201ENST00000604432 568 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 MIR6817-201ENST00000615588 66 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 MTND4P35-201ENST00000604257 1375 ntBASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
PCDHGA1Q9Y5H4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 Y_RNA.22-201ENST00000362492 102 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 Y_RNA.201-201ENST00000364052 96 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 SNORA75-201ENST00000384158 137 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 Y_RNA.534-201ENST00000384599 112 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU6-658P-201ENST00000384606 106 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 Y_RNA.553-201ENST00000384670 102 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU2-39P-201ENST00000410604 198 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC114491.1-201ENST00000416095 246 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AL592045.1-201ENST00000429867 352 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AL591704.1-201ENST00000432574 275 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AL360221.1-201ENST00000445989 335 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC107626.1-201ENST00000471084 183 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 RN7SL633P-201ENST00000488974 297 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC010424.1-201ENST00000506336 297 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 RN7SKP43-201ENST00000516173 320 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC090572.1-201ENST00000519251 160 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AP001646.1-201ENST00000527936 915 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC022893.3-201ENST00000607665 437 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 AC109347.2-201ENST00000610220 349 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms