Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 RNA5SP281-201ENST00000516504 135 ntBASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 AP003730.1-201ENST00000524605 285 ntBASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 AC012616.1-201ENST00000600294 197 ntBASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 RMST_8.1-201ENST00000610287 165 ntBASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 RNA5SP440-201ENST00000612665 119 ntBASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 AL355480.1-201ENST00000629041 99 ntBASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 U2.21-201ENST00000637295 81 ntBASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHB13Q9Y5F0 AP005432.1-201ENST00000580891 3485 ntBASIC6.09□□□□□ -1.44
PCDHB13Q9Y5F0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
PCDHB13Q9Y5F0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PCDHB13Q9Y5F0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
PCDHB13Q9Y5F0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 AC125336.1-201ENST00000508893 2827 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 RNU6-1080P-201ENST00000383982 107 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 RN7SKP293-201ENST00000411389 296 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 CYCSP51-201ENST00000443545 318 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 AC103975.1-201ENST00000482506 483 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 AC117454.1-201ENST00000491120 168 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 AC022404.1-201ENST00000555320 273 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 AL160236.1-201ENST00000556317 195 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 MIR1273E-201ENST00000581165 102 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 AC132068.1-201ENST00000623805 459 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 MIR3529-201ENST00000637713 78 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 AC106871.1-201ENST00000568324 3102 ntBASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB13Q9Y5F0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 ABCC13-202ENST00000463099 3842 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 Y_RNA.432-201ENST00000384087 111 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 RNU6-140P-201ENST00000384566 108 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 SNORA17A-201ENST00000391185 133 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 Y_RNA.587-201ENST00000391210 103 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 AC092047.1-201ENST00000424997 240 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 OR2AH1P-201ENST00000425717 928 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 AC073465.2-201ENST00000440938 498 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 AC010469.1-201ENST00000463864 576 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 RPSAP50-201ENST00000481955 852 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 SNORA70.12-201ENST00000516084 153 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 RNU7-115P-201ENST00000516433 55 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 AC015720.1-201ENST00000565251 277 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 AL137843.1-201ENST00000605078 385 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 uc_338.7-201ENST00000621834 124 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 SNORA17.5-201ENST00000630429 132 ntBASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
PCDHB13Q9Y5F0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 SNORD87-201ENST00000364849 89 ntBASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 RNU6-1014P-201ENST00000383940 103 ntBASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 Y_RNA.549-201ENST00000384657 102 ntBASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 RNU11-201ENST00000387069 134 ntBASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 U3.26-201ENST00000391236 204 ntBASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 RNA5SP390-201ENST00000410191 113 ntBASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 AC126124.2-201ENST00000413542 321 ntBASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 BX276092.6-201ENST00000430476 250 ntBASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 TOMM22P2-201ENST00000430735 237 ntBASIC6.06□□□□□ -1.44
PCDHB13Q9Y5F0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms