Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
YIPF1Q9Y548 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC004972.1-201ENST00000623934 2209 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 RNU6-1287P-201ENST00000362914 107 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 RNU6-996P-201ENST00000365438 107 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 SNORA4.3-201ENST00000365564 137 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 Y_RNA.450-201ENST00000384198 113 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 RNU6-1060P-201ENST00000384664 107 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 CISD1P1-201ENST00000393907 327 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 BTF3P7-201ENST00000407097 488 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 RNA5SP111-201ENST00000411386 101 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC012498.1-201ENST00000424037 437 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 GPM6BP2-201ENST00000432046 144 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC016691.1-201ENST00000441321 413 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 GPM6BP1-201ENST00000446387 144 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC083798.1-201ENST00000472671 131 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC092989.1-201ENST00000481235 277 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 SNORA40.12-201ENST00000516329 111 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 RNU6-685P-201ENST00000517088 95 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC107294.1-201ENST00000609524 467 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AP001486.3-201ENST00000615334 372 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 U6atac.1-201ENST00000616025 117 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC006111.3-201ENST00000622137 383 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 Z99571.1-201ENST00000636677 394 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.95□□□□□ -1.94
YIPF1Q9Y548 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.95□□□□□ -1.94
YIPF1Q9Y548 AC006020.1-201ENST00000420179 1854 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 RNY4P14-201ENST00000363656 96 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 SNORA69-201ENST00000383895 132 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 RNU6-116P-201ENST00000384042 109 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 RNU6-140P-201ENST00000384566 108 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 Y_RNA.534-201ENST00000384599 112 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 SNORA1.3-201ENST00000384676 136 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 RNU2-52P-201ENST00000410680 190 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 USP9YP27-201ENST00000418455 438 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 RPL7P46-201ENST00000425129 740 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 MTCO1P20-201ENST00000425366 358 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AL590664.1-201ENST00000448065 339 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AC003071.1-201ENST00000451219 789 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 GMFBP1-201ENST00000467831 427 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AL163973.1-201ENST00000484753 577 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AC006483.1-201ENST00000487308 313 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AC117522.3-201ENST00000507974 584 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AC098591.2-201ENST00000510152 315 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 RNA5SP401-201ENST00000515920 127 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 RNU6-1281P-201ENST00000516223 105 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 RN7SKP219-201ENST00000516825 296 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AP005435.4-201ENST00000529514 284 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 RANP3-201ENST00000530970 276 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AL512310.1-201ENST00000548639 172 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 TRAV37-201ENST00000553906 342 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 MIR4703-201ENST00000577728 79 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 NRBF2P5-201ENST00000603087 788 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AL133393.1-201ENST00000603277 287 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AC004805.2-201ENST00000605382 482 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AC107294.3-201ENST00000609211 526 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 MIR6076-201ENST00000617521 113 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.94□□□□□ -1.94
YIPF1Q9Y548 MIR1321-201ENST00000637766 79 ntBASIC2.94□□□□□ -1.94
YIPF1Q9Y548 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.93□□□□□ -1.94
YIPF1Q9Y548 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.93□□□□□ -1.94
YIPF1Q9Y548 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
YIPF1Q9Y548 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
YIPF1Q9Y548 AP003122.5-201ENST00000527668 3766 ntBASIC2.93□□□□□ -1.94
YIPF1Q9Y548 AC103988.1-201ENST00000566382 2177 ntBASIC2.93□□□□□ -1.94
YIPF1Q9Y548 FTLP6-201ENST00000355274 422 ntBASIC2.93□□□□□ -1.94
YIPF1Q9Y548 RNU6-859P-201ENST00000362728 107 ntBASIC2.93□□□□□ -1.94
YIPF1Q9Y548 RNU6-270P-201ENST00000364131 105 ntBASIC2.93□□□□□ -1.94
YIPF1Q9Y548 RNU1-112P-201ENST00000364401 164 ntBASIC2.93□□□□□ -1.94
YIPF1Q9Y548 Y_RNA.255-201ENST00000364581 97 ntBASIC2.93□□□□□ -1.94
YIPF1Q9Y548 Y_RNA.402-201ENST00000383972 102 ntBASIC2.93□□□□□ -1.94
YIPF1Q9Y548 MIR512-1-201ENST00000384913 84 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms