Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 CACYBPP2-201ENST00000453625 678 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 RPL31P3-201ENST00000458430 332 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 SCARNA24.1-201ENST00000516465 137 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 COX6CP5-201ENST00000527162 228 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AC087883.1-201ENST00000551882 391 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AP000787.2-201ENST00000604432 568 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AC098614.4-201ENST00000607601 462 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 MTND4P35-201ENST00000604257 1375 ntBASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
ATG4BQ9Y4P1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AC135776.4-201ENST00000624300 1904 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-169P-201ENST00000365336 107 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 MIR558-201ENST00000384920 94 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 MIR34A-201ENST00000385130 110 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 RNA5SP210-201ENST00000391034 120 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 RPLP0P7-201ENST00000416050 667 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 C1DP2-201ENST00000418167 426 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 USP9YP20-201ENST00000419224 558 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 ARL5AP4-201ENST00000430731 512 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 RPS15AP34-201ENST00000487776 387 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AC117522.1-201ENST00000509821 380 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AC108078.2-201ENST00000510750 236 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-914P-201ENST00000516749 109 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AC004486.1-201ENST00000546846 233 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 MIR3913-1-201ENST00000577744 102 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 NRBF2P1-201ENST00000587407 859 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AC006566.1-201ENST00000608943 513 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AL449363.1-201ENST00000617815 186 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 U6.99-201ENST00000637524 83 ntBASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ATG4BQ9Y4P1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 Y_RNA.22-201ENST00000362492 102 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 Y_RNA.77-201ENST00000362962 107 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 SNORA4.3-201ENST00000365564 137 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 SNORD116-9-201ENST00000384000 95 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 SNORD116-3-201ENST00000384287 95 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 SNORD116-7-201ENST00000384404 95 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 SNORD116-5-201ENST00000384462 95 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 BX682237.1-201ENST00000415016 335 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 MED13P1-201ENST00000428342 171 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 KATNBL1P3-201ENST00000443475 909 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC233279.1-201ENST00000455300 423 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 RPL23AP70-201ENST00000483361 460 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC010424.1-201ENST00000506336 297 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 RNA5SP282-201ENST00000516355 108 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AP000873.5-201ENST00000533906 236 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 ELOCP31-201ENST00000540463 467 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC006199.1-201ENST00000548728 219 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC006362.1-201ENST00000567392 174 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC024619.4-201ENST00000580924 316 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 MIR3670-2-201ENST00000582974 65 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 MIR3670-1-201ENST00000584160 65 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 MIR3670-3-201ENST00000584855 65 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AC087752.4-201ENST00000605911 462 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AL121992.2-201ENST00000606262 256 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 MIR15A-201ENST00000607334 83 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 MIR3670-4-201ENST00000612260 65 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 uc_338.14-201ENST00000613162 166 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms