Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.09□□□□□ -2.23
RNF11Q9Y3C5 AC079598.5-201ENST00000547460 117 ntBASIC1.09□□□□□ -2.23
RNF11Q9Y3C5 AL121821.2-201ENST00000556081 394 ntBASIC1.09□□□□□ -2.23
RNF11Q9Y3C5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.09□□□□□ -2.23
RNF11Q9Y3C5 AP002906.1-201ENST00000603405 233 ntBASIC1.09□□□□□ -2.23
RNF11Q9Y3C5 MIR6715A-201ENST00000615929 79 ntBASIC1.09□□□□□ -2.23
RNF11Q9Y3C5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 RNU6-1078P-201ENST00000364522 103 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 RNU2-68P-201ENST00000410878 191 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 C1DP1-201ENST00000426049 402 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 USP9YP24-201ENST00000434374 697 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 AL353706.1-201ENST00000436728 494 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 AP003497.1-201ENST00000528472 562 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 MTCO2P15-201ENST00000532655 656 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 AC023825.1-201ENST00000566704 1030 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 AC016911.1-201ENST00000613297 452 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 AC017037.3-201ENST00000625016 472 ntBASIC1.08□□□□□ -2.24
RNF11Q9Y3C5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 RNU6-353P-201ENST00000364266 108 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 RNU6-359P-201ENST00000365466 108 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 RNU1-39P-201ENST00000383897 165 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 MIR513A1-201ENST00000385138 129 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 RNU6-932P-201ENST00000391108 106 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 MIR1283-2-201ENST00000408621 87 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 AC078974.1-201ENST00000411597 223 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 FCF1P6-201ENST00000456841 595 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 snoU13.8-201ENST00000458890 104 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 RNA5SP57-201ENST00000459463 123 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 AC108729.2-201ENST00000476543 840 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 AC093677.1-201ENST00000514414 678 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 RNU6-551P-201ENST00000516661 103 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 CYB5AP5-201ENST00000549779 389 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 PSMA3P-201ENST00000555485 635 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 AL713866.2-201ENST00000603579 219 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 AP000942.3-201ENST00000603702 160 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 AC021646.1-201ENST00000605469 484 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 AC084824.4-201ENST00000620106 731 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 AL118508.4-201ENST00000624142 1176 ntBASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RNF11Q9Y3C5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 ZNF29P-201ENST00000225587 168 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 MIR424-201ENST00000362227 98 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 RNU6-28P-201ENST00000362378 107 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 RNU6-482P-201ENST00000391068 107 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 SNORD97-201ENST00000459187 142 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 AC006512.1-201ENST00000468816 291 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 RNU6-927P-201ENST00000516199 100 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 RRN3P3-201ENST00000549207 578 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 AL356432.3-201ENST00000568952 465 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 MIR4298-201ENST00000584380 73 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 RN7SL622P-201ENST00000585292 275 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 PRR13P7-201ENST00000605538 430 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 AC018638.7-201ENST00000605836 1114 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 AL390208.1-201ENST00000605885 644 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 AL359314.1-201ENST00000616913 261 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 AC009268.2-201ENST00000621925 457 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.06□□□□□ -2.24
RNF11Q9Y3C5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 Y_RNA.234-201ENST00000364409 97 ntBASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 AC004965.1-201ENST00000413033 213 ntBASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 TAF13P2-201ENST00000416876 286 ntBASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 CR848007.2-201ENST00000424918 787 ntBASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 AC092427.1-201ENST00000439177 601 ntBASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 AC104058.1-201ENST00000448028 297 ntBASIC1.05□□□□□ -2.24
RNF11Q9Y3C5 AC245102.2-201ENST00000448956 180 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms