Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 RNA5SP28-201ENST00000363841 119 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 LAP3P1-201ENST00000403648 294 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 MIR548I2-201ENST00000408348 149 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 Y_RNA.623-201ENST00000411128 95 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 TMEM167AP1-201ENST00000423409 219 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 RPL7AP28-201ENST00000464513 571 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 AC120057.2-201ENST00000571520 271 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 MIR5096-201ENST00000583713 70 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 AC008745.1-201ENST00000604064 271 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 SNX18P1Y-201ENST00000616231 511 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 MIR7154-201ENST00000620673 73 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 AP001148.1-201ENST00000624124 2359 ntBASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
AP4E1Q9UPM8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
AP4E1Q9UPM8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
AP4E1Q9UPM8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
AP4E1Q9UPM8 AC010300.1-201ENST00000600671 5134 ntBASIC4.46□□□□□ -1.69
AP4E1Q9UPM8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.83-201ENST00000363005 113 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.143-201ENST00000363520 106 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.405-201ENST00000383979 100 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.451-201ENST00000384200 100 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 RNU6-125P-201ENST00000384505 107 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.524-201ENST00000384564 100 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.561-201ENST00000384694 100 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.793-201ENST00000411222 111 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 Z85995.1-201ENST00000415547 335 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 AC068287.1-201ENST00000430283 295 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 AL358472.1-201ENST00000431295 329 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 U8.22-201ENST00000459141 133 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 RNU7-120P-201ENST00000459334 63 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 RPS26P28-201ENST00000470806 348 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 RPL21P13-201ENST00000488305 481 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 AC104164.2-201ENST00000496953 495 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 AC006064.5-201ENST00000541782 248 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 MIR4700-201ENST00000578311 74 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 AC008121.1-201ENST00000603244 268 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 MIR6798-201ENST00000612887 67 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 BMS1P21-201ENST00000634565 365 ntBASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
AP4E1Q9UPM8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 MIR411-201ENST00000362239 96 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 RNU6-428P-201ENST00000362942 107 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 RNU6-378P-201ENST00000384324 107 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AL079342.1-201ENST00000401460 267 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AL732292.1-201ENST00000426692 226 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 DNAJC19P7-201ENST00000428811 344 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 RPS29P17-201ENST00000430795 166 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AC009963.2-201ENST00000453431 138 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AC034236.1-201ENST00000469891 373 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 RPS20P22-201ENST00000473700 357 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AC108145.1-201ENST00000503770 153 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AK3P2-201ENST00000507976 429 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AC025755.1-201ENST00000521306 278 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 HIGD1AP5-201ENST00000529959 259 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 TRAV8-5-201ENST00000537369 341 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AC005476.1-201ENST00000554427 397 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AC023575.1-201ENST00000580510 358 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 RPL23AP78-201ENST00000599928 470 ntBASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 AL356218.2-201ENST00000605264 187 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms