Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 Z99571.1-201ENST00000636677 394 ntBASIC3.49□□□□□ -1.85
AMFRQ9UKV5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
AMFRQ9UKV5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 MIR148B-201ENST00000362252 99 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 RNU6-600P-201ENST00000362524 99 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 RNU6-1167P-201ENST00000363227 94 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 RNU6-1303P-201ENST00000364841 107 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 Y_RNA.387-201ENST00000383918 102 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 RNU6-45P-201ENST00000384471 107 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 MIR578-201ENST00000384828 96 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 EI24P2-201ENST00000397776 1076 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 MIR450B-201ENST00000401182 78 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AL356057.2-201ENST00000403318 432 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 MIR548K-201ENST00000408406 116 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 RPL21P90-201ENST00000415692 466 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 NDUFB4P7-201ENST00000423198 363 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 RPL27AP8-201ENST00000424277 446 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AC007389.2-201ENST00000434630 306 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 RPS3AP52-201ENST00000435639 297 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 HSPD1P21-201ENST00000436541 245 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 HMGB1P12-201ENST00000438594 598 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AC087884.1-201ENST00000469738 328 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AC117503.1-201ENST00000472241 394 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 RPL31P60-201ENST00000478450 367 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 MTCO1P29-201ENST00000496868 288 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 SNORA14.1-201ENST00000516113 141 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 RNU6-566P-201ENST00000516790 107 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 MIR5692C1-201ENST00000585309 91 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AL161798.1-201ENST00000604630 131 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AC245389.1-201ENST00000605141 529 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AL133255.1-201ENST00000606374 441 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AP002826.1-201ENST00000608835 315 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 AC022418.1-201ENST00000624118 445 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 U6.98-201ENST00000637157 84 ntBASIC3.48□□□□□ -1.85
AMFRQ9UKV5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
AMFRQ9UKV5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 RNU4-35P-201ENST00000362588 141 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 RNU1-70P-201ENST00000362618 164 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 VN1R36P-201ENST00000414936 291 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 AC063979.1-201ENST00000415539 377 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 Z85995.1-201ENST00000415547 335 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 SETP5-201ENST00000437270 562 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 RPS24P13-201ENST00000442520 397 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 RNU1-95P-201ENST00000516357 160 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 RNU6-1069P-201ENST00000516612 133 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 RNU1-128P-201ENST00000516704 160 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 RNA5SP454-201ENST00000517231 127 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 FRG2DP-202ENST00000566967 323 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 MIR3941-201ENST00000582572 103 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 AC073539.2-201ENST00000597113 165 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 APOOP1-201ENST00000604695 592 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 AC106900.2-201ENST00000604994 317 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 AL121772.2-201ENST00000614331 297 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 AL359757.2-201ENST00000624309 274 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 AL512643.1-201ENST00000635735 524 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 MTND4P23-201ENST00000447723 1363 ntBASIC3.47□□□□□ -1.85
AMFRQ9UKV5 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AMFRQ9UKV5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
AMFRQ9UKV5 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
AMFRQ9UKV5 AC091152.2-201ENST00000591628 2569 ntBASIC3.46□□□□□ -1.86
AMFRQ9UKV5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
AMFRQ9UKV5 RNA5SP295-201ENST00000362655 121 ntBASIC3.46□□□□□ -1.86
AMFRQ9UKV5 RNA5SP124-201ENST00000362739 110 ntBASIC3.46□□□□□ -1.86
AMFRQ9UKV5 Y_RNA.212-201ENST00000364177 102 ntBASIC3.46□□□□□ -1.86
AMFRQ9UKV5 AL354751.2-201ENST00000415471 210 ntBASIC3.46□□□□□ -1.86
AMFRQ9UKV5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.46□□□□□ -1.86
AMFRQ9UKV5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.46□□□□□ -1.86
AMFRQ9UKV5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.46□□□□□ -1.86
AMFRQ9UKV5 AC073063.1-201ENST00000434352 607 ntBASIC3.46□□□□□ -1.86
AMFRQ9UKV5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.46□□□□□ -1.86
AMFRQ9UKV5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.46□□□□□ -1.86
AMFRQ9UKV5 AL360271.2-201ENST00000447710 161 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms