Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC008121.1-201ENST00000603244 268 ntBASIC3.72□□□□□ -1.81
CDC42EP3Q9UKI2 AL442067.1-201ENST00000613261 223 ntBASIC3.72□□□□□ -1.81
CDC42EP3Q9UKI2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
CDC42EP3Q9UKI2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDC42EP3Q9UKI2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDC42EP3Q9UKI2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDC42EP3Q9UKI2 AC011266.1-201ENST00000624119 3569 ntBASIC3.72□□□□□ -1.81
CDC42EP3Q9UKI2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CDC42EP3Q9UKI2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDC42EP3Q9UKI2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AL353746.1-201ENST00000566293 6881 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 SNORD50.1-201ENST00000362987 71 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 RNU6-379P-201ENST00000363813 104 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 Y_RNA.214-201ENST00000364201 112 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 DEFB109C-201ENST00000382575 264 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 DEFB109B-201ENST00000382656 264 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 RNU6-472P-201ENST00000384299 107 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 Y_RNA.526-201ENST00000384572 110 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 MT-TR-201ENST00000387439 65 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 RNA5SP44-201ENST00000410446 133 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 RN7SKP58-201ENST00000411010 305 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AC092047.1-201ENST00000424997 240 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 PIGFP3-201ENST00000441918 722 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 DYNLT3P2-201ENST00000442517 295 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AC009237.8-201ENST00000445492 379 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 NDUFS5P3-201ENST00000450668 321 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AC078918.1-201ENST00000498515 228 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AC008958.1-201ENST00000511047 682 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 RNY3P15-201ENST00000516297 97 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 RNA5SP165-201ENST00000517142 115 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AC103996.1-201ENST00000555468 102 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 HMGB1P14-201ENST00000557424 591 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 MIR4286-201ENST00000580651 93 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 SRGNP1-201ENST00000603392 451 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AC008962.1-201ENST00000605729 304 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 MIR6075-201ENST00000620782 95 ntBASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
CDC42EP3Q9UKI2 AC118273.1-201ENST00000525324 3006 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AC032011.1-201ENST00000611703 1549 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 RNY3P11-201ENST00000364153 102 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 RNA5SP387-201ENST00000364226 106 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 Y_RNA.307-201ENST00000365022 117 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 Y_RNA.396-201ENST00000383949 103 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 MIR521-1-201ENST00000384902 87 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 MIR34A-201ENST00000385130 110 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 SAR1AP2-201ENST00000392696 594 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 PTMAP2-201ENST00000397627 327 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 RPS29P13-201ENST00000402041 169 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 RNU2-68P-201ENST00000410878 191 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AC009310.1-201ENST00000414414 451 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 RBMY1KP-201ENST00000423480 476 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 Z82210.1-201ENST00000440037 231 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AL078601.1-201ENST00000444542 271 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AL645939.1-201ENST00000453429 797 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 ANP32BP2-201ENST00000454525 545 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 RPS29P27-201ENST00000463711 170 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 RPL30P10-201ENST00000488148 337 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 RNU6-1073P-201ENST00000517182 106 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AC005476.1-201ENST00000554427 397 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AC093249.4-201ENST00000564755 259 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AC006600.1-201ENST00000572529 153 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AC112484.5-201ENST00000624189 228 ntBASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDC42EP3Q9UKI2 ZNF72P-201ENST00000425869 1908 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms