Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SNORA80E-201ENST00000384744 137 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AL663109.1-201ENST00000411498 844 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 RPL17P12-201ENST00000413391 526 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 CDK8P2-201ENST00000415020 547 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC007919.1-201ENST00000429380 217 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC020550.1-201ENST00000447385 163 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC013267.1-201ENST00000458227 267 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 RNU6-927P-201ENST00000516199 100 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC106038.2-201ENST00000520706 568 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AL133241.1-201ENST00000556832 487 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AL391261.3-201ENST00000557194 520 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 OR1M4P-201ENST00000589199 287 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AL355877.2-201ENST00000603670 358 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC116312.1-201ENST00000606841 314 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC007038.2-201ENST00000608095 740 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AL359740.1-201ENST00000624340 592 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 AC016717.2-201ENST00000609089 5141 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 ZNF658B-202ENST00000615961 3375 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 CCT4P2-201ENST00000233836 1548 ntBASIC2.78□□□□□ -1.97
CLIP2Q9UDT6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 RNY3P14-201ENST00000384309 102 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AL513475.1-201ENST00000406602 315 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 RNU2-66P-201ENST00000410650 161 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 RPL21P24-201ENST00000413752 448 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 RPL30P16-201ENST00000419341 429 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 MTCYBP5-201ENST00000423752 1135 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC011753.1-201ENST00000451001 220 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 MTCYBP1-201ENST00000454315 1119 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC055855.1-201ENST00000489563 579 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AL160314.1-201ENST00000490836 438 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 FABP5P5-201ENST00000515537 406 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 SNORA31.18-201ENST00000517043 134 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 COX6CP5-201ENST00000527162 228 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 MYL12BP1-201ENST00000569826 507 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 MIR548AB-201ENST00000584917 84 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 BNIP3P23-201ENST00000599655 511 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 RBM11P1-201ENST00000604951 799 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC126118.1-201ENST00000607744 628 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC073534.2-201ENST00000620377 381 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC112204.3-201ENST00000623822 332 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 AC092125.1-201ENST00000562568 1995 ntBASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLIP2Q9UDT6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 RNY4P24-201ENST00000362735 96 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 RNU1-51P-201ENST00000365345 176 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 Y_RNA.390-201ENST00000383932 102 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 SNORA70B-201ENST00000384210 135 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 MIR888-201ENST00000401186 77 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC005094.1-201ENST00000440420 368 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 RBMX2P4-201ENST00000441256 376 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 SNRPGP9-201ENST00000456025 225 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC010631.1-201ENST00000474150 156 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 RPL23AP41-201ENST00000484754 458 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC114786.4-201ENST00000508771 728 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC114797.1-201ENST00000514003 728 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC013828.2-201ENST00000532487 235 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 GLYCAM1-201ENST00000546596 285 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC093012.1-202ENST00000549403 582 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC087883.1-201ENST00000551882 391 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms