Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU7-136P-201ENST00000458819 69 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 RPL37P6-201ENST00000460682 294 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 OR6C7P-201ENST00000547875 934 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 PSMA3P-201ENST00000555485 635 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AL354943.1-201ENST00000572103 781 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AL353997.4-201ENST00000586196 166 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AC069304.2-201ENST00000605154 435 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AL583856.2-201ENST00000606298 543 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AC099063.3-201ENST00000642066 185 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 MTND5P10-201ENST00000603719 1809 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 SNORD115-3-201ENST00000363100 82 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 RNU6-952P-201ENST00000391164 108 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 RNA5SP465-201ENST00000391195 109 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 AL033519.2-201ENST00000403958 392 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 AL021407.1-201ENST00000404531 386 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 MIR1283-2-201ENST00000408621 87 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 RNU2-42P-201ENST00000410697 113 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 RPS15AP9-201ENST00000439856 381 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 MTND2P3-201ENST00000452458 470 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 AC006512.1-201ENST00000468816 291 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 RPS15AP36-201ENST00000492022 382 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 OR5B19P-201ENST00000531766 928 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 AC079148.1-201ENST00000565944 819 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 AL356432.3-201ENST00000568952 465 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 ELOCP5-201ENST00000604924 333 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 AC016925.2-201ENST00000605108 242 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 AC018638.7-201ENST00000605836 1114 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 AC138627.2-201ENST00000624202 601 ntBASIC1.34□□□□□ -2.19
VPS29Q9UBQ0 AP000776.1-201ENST00000530032 1663 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 RNU5E-1-201ENST00000362477 120 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 RNU5B-1-201ENST00000363286 116 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 RNU6-1122P-201ENST00000384449 107 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 RN7SKP51-201ENST00000410781 304 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 GTF2IP3-201ENST00000433887 494 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 FO393415.2-201ENST00000480085 343 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 HMGB1P28-201ENST00000507778 552 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 ACA59.2-201ENST00000517061 156 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 AP005597.4-201ENST00000526762 229 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 AC103987.3-201ENST00000582071 292 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 NDUFA8P1-201ENST00000605525 367 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 AC087045.1-201ENST00000605856 382 ntBASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS29Q9UBQ0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 RNU1-57P-201ENST00000384491 166 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 MIR29C-201ENST00000385231 88 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 RNU6-174P-201ENST00000410406 106 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 USP9YP26-201ENST00000421008 661 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 ISCA1P1-201ENST00000426679 387 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 AC244035.1-201ENST00000430042 390 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 MTATP6P30-201ENST00000443540 664 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 AC079776.3-201ENST00000450665 370 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 FAM206BP-201ENST00000510179 541 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 RNU6-583P-201ENST00000516012 92 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 RNU6-667P-201ENST00000517186 102 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 AP001542.1-201ENST00000591314 200 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 DPPA3P3-201ENST00000603842 430 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 RMST_6.1-201ENST00000611980 203 ntBASIC1.32□□□□□ -2.2
VPS29Q9UBQ0 RNU1-62P-201ENST00000362599 164 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 RNU6-338P-201ENST00000383888 105 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 AL139397.2-201ENST00000404529 772 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 AC009310.1-201ENST00000414414 451 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 C1DP1-201ENST00000426049 402 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 AL357134.1-201ENST00000445848 426 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms