Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 Y_RNA.48-201ENST00000362710 103 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 SNORA41-201ENST00000384675 132 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 RNU2-68P-201ENST00000410878 191 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 AL627311.1-201ENST00000431514 115 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 TBCAP1-201ENST00000436520 327 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 MTATP8P1-201ENST00000467115 207 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 AC023141.12-201ENST00000512399 199 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 ACA59.1-201ENST00000515966 143 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 RNU6-764P-201ENST00000516396 105 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 AC092447.9-201ENST00000603395 144 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 AL132822.1-201ENST00000617063 513 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 7SK.10-201ENST00000621414 298 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 RNA5SP189-201ENST00000364920 115 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 SNORA40C-201ENST00000391285 128 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 PPIAP31-201ENST00000405422 495 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 SNORA3C-201ENST00000408792 125 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 SNORD56-201ENST00000413522 71 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 MRPS18CP6-201ENST00000423587 223 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 AL353997.1-201ENST00000432936 108 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 Z82210.1-201ENST00000440037 231 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 AC011816.1-201ENST00000441346 546 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 NDUFB1P2-201ENST00000449477 176 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 ANP32BP2-201ENST00000454525 545 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 RNU6-1037P-201ENST00000459571 107 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 RPL9P32-201ENST00000464118 620 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 RPL31P13-201ENST00000484151 370 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 RPL31P61-201ENST00000496160 376 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 AC020593.1-201ENST00000507399 299 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 RNU6-572P-201ENST00000516724 80 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 YPEL5P3-201ENST00000547227 352 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 AL117187.1-201ENST00000555482 181 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 MIR3671-201ENST00000580455 88 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 MIR4273-201ENST00000582824 84 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 AC136601.2-201ENST00000604356 474 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 AC138627.2-201ENST00000624202 601 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 Z69720.2-201ENST00000624755 279 ntBASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCMF1Q9P0J7 USP8P1-201ENST00000494673 3183 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 HSPA8P1-201ENST00000425843 1833 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 RPL9P7-201ENST00000330965 580 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 RNA5SP399-201ENST00000364003 117 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 RNU6-1317P-201ENST00000364582 104 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 RNU6-827P-201ENST00000365553 106 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 RNU6-196P-201ENST00000384315 107 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 RNU1-89P-201ENST00000384592 164 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 MIR3074-201ENST00000384885 81 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AL513475.1-201ENST00000406602 315 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 RNU6-174P-201ENST00000410406 106 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AL513043.1-201ENST00000439124 535 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 RPL9P9-202ENST00000466501 579 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 RPL23AP45-201ENST00000476406 468 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 FO393415.2-201ENST00000480085 343 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AC015911.1-201ENST00000495111 156 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AC106785.1-201ENST00000565935 262 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AC008121.1-201ENST00000603244 268 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 MIR6875-201ENST00000617506 72 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms