Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 ARL2BPP4-201ENST00000506854 471 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 AC091965.2-201ENST00000512324 613 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 RNA5SP112-201ENST00000515937 99 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 RNU6-123P-201ENST00000516163 102 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 SNORD27.1-201ENST00000516319 72 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 RNU6-685P-201ENST00000517088 95 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 AC009127.3-201ENST00000570531 403 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 MIR3913-1-201ENST00000577744 102 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 MIR3117-201ENST00000584034 78 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 AL158032.1-201ENST00000605401 106 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 AC010678.1-201ENST00000614118 713 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 AC138932.5-201ENST00000617759 563 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 MIR622-201ENST00000638396 96 ntBASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
CHCHD3Q9NX63 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 RNU6-486P-201ENST00000363116 107 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 SNORD46.1-201ENST00000364139 104 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 MIR518D-201ENST00000385014 87 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 MIR34A-201ENST00000385130 110 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 MIR454-201ENST00000390180 115 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 RNA5SP210-201ENST00000391034 120 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 Y_RNA.623-201ENST00000411128 95 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 RNU6-956P-201ENST00000458868 103 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 AC080013.2-201ENST00000460866 323 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 RPL7P49-201ENST00000471402 708 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 HMGB1P30-201ENST00000492455 606 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 AL358832.1-201ENST00000497800 389 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 AC107222.1-201ENST00000510899 637 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 RN7SKP272-201ENST00000516988 232 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 MIR5692A1-201ENST00000580523 69 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 AL137847.3-201ENST00000611521 109 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 MTND4P27-201ENST00000450813 1354 ntBASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CHCHD3Q9NX63 AL109809.4-201ENST00000603520 2185 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 SNORA63.1-201ENST00000362493 131 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 CISD1P1-201ENST00000393907 327 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 RNU4-47P-201ENST00000410876 114 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC114491.1-201ENST00000416095 246 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 RPL31P35-201ENST00000431058 377 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 MTATP6P16-201ENST00000434543 526 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 IPO7P1-201ENST00000442031 636 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC092001.1-201ENST00000453012 261 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC006026.2-201ENST00000457376 180 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 RNU7-26P-201ENST00000458980 63 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 MTAPP1-201ENST00000489154 819 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC090096.1-201ENST00000489168 390 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC018437.1-201ENST00000492214 406 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC116655.1-201ENST00000508324 901 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 MTCO3P28-201ENST00000513351 515 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 SCARNA3-201ENST00000517097 143 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 MTCO2P4-201ENST00000517968 247 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC008521.1-201ENST00000587471 187 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC005261.5-201ENST00000596280 355 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 AC005332.10-201ENST00000612725 619 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 MIR7975-201ENST00000619350 68 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 U6.114-201ENST00000636407 96 ntBASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.67□□□□□ -1.98
CHCHD3Q9NX63 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.66□□□□□ -1.98
CHCHD3Q9NX63 RNU1-33P-201ENST00000364249 162 ntBASIC2.66□□□□□ -1.98
CHCHD3Q9NX63 Y_RNA.367-201ENST00000365544 101 ntBASIC2.66□□□□□ -1.98
CHCHD3Q9NX63 MIR183-201ENST00000384958 110 ntBASIC2.66□□□□□ -1.98
CHCHD3Q9NX63 SNORD67-201ENST00000390833 111 ntBASIC2.66□□□□□ -1.98
CHCHD3Q9NX63 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.66□□□□□ -1.98
CHCHD3Q9NX63 AL365338.1-201ENST00000422282 858 ntBASIC2.66□□□□□ -1.98
CHCHD3Q9NX63 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms