Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 RNA5SP388-201ENST00000362584 119 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 RNY1P16-201ENST00000363063 111 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 RNU6-76P-201ENST00000384060 104 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 SNORA70E-201ENST00000384492 135 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 Y_RNA.577-201ENST00000384794 101 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 RNU6-882P-201ENST00000391025 103 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AL022722.2-201ENST00000402519 180 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 RNU6-607P-201ENST00000411283 108 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 RPL26P6-201ENST00000440913 438 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AC006011.1-201ENST00000442758 349 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AL590399.6-201ENST00000446396 307 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AL359073.1-201ENST00000448036 403 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 RPL37P6-201ENST00000460682 294 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AC006517.1-201ENST00000480485 328 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 SNORA40.14-201ENST00000516543 86 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 TRAV32-201ENST00000553993 340 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AC025884.1-201ENST00000556034 378 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 LRRC37A5P-203ENST00000580181 585 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AC244505.7-201ENST00000599675 272 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AL158827.2-201ENST00000602494 330 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AC004805.2-201ENST00000605382 482 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 AL691447.3-201ENST00000635020 330 ntBASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.66□□□□□ -1.82
PARPBPQ9NWS1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PARPBPQ9NWS1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PARPBPQ9NWS1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.65□□□□□ -1.82
PARPBPQ9NWS1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PARPBPQ9NWS1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PARPBPQ9NWS1 Y_RNA.14-201ENST00000362415 103 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 Y_RNA.105-201ENST00000363182 111 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 RNA5SP322-201ENST00000363617 119 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AC068538.1-201ENST00000376856 336 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 MIR1302-6-201ENST00000408466 90 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AC079780.1-201ENST00000428259 207 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AL592045.1-201ENST00000429867 352 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 CKS1BP5-201ENST00000434172 273 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 MTCO3P8-201ENST00000453691 755 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 SNORA25.11-201ENST00000515935 105 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 Y_RNA.673-201ENST00000516306 88 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 RNA5SP471-201ENST00000516971 106 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AC025627.2-201ENST00000576220 160 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 MIR5692A1-201ENST00000580523 69 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AL121917.1-203ENST00000605534 577 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AC096772.1-201ENST00000609146 564 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AC008785.1-201ENST00000624475 456 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 ZNF962P-201ENST00000443465 3140 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.65□□□□□ -1.83
PARPBPQ9NWS1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 Y_RNA.19-201ENST00000362462 99 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 RN7SKP227-201ENST00000364445 330 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 Y_RNA.324-201ENST00000365165 102 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 RNU6-596P-201ENST00000365395 98 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 RNU6-708P-201ENST00000384217 107 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 SNORA36C-201ENST00000384289 132 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 Y_RNA.533-201ENST00000384596 114 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 MIR1250-201ENST00000408098 113 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 AC017083.1-201ENST00000428093 483 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 RPS3AP46-201ENST00000448352 682 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 RPL31P60-201ENST00000478450 367 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 AC022493.1-201ENST00000492984 337 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 VN1R104P-201ENST00000505115 1009 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 RNU6-570P-201ENST00000517051 105 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 AC069113.1-201ENST00000517763 267 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 MIR4273-201ENST00000582824 84 ntBASIC3.64□□□□□ -1.83
PARPBPQ9NWS1 MIR4697-201ENST00000582977 78 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms