Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 SUB1P1-201ENST00000524415 382 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 MTND1P35-201ENST00000526739 508 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 NUTF2P8-201ENST00000604593 363 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AL161756.2-201ENST00000604597 246 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AC007179.3-201ENST00000604976 235 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AL591516.1-201ENST00000611326 274 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 uc_338.25-201ENST00000613756 156 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 MTCO1P12-201ENST00000414273 1543 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 MTND5P27-201ENST00000428871 1720 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AC103988.1-201ENST00000566382 2177 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AC091564.4-201ENST00000533934 2194 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 SNORD3E-201ENST00000362899 217 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-434P-201ENST00000384376 107 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-45P-201ENST00000384471 107 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-393P-201ENST00000384475 107 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 SNORA46-201ENST00000384762 135 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 MIR34B-201ENST00000385076 84 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AL592114.1-201ENST00000403842 483 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 RPL5P18-201ENST00000406671 891 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 MIR1277-201ENST00000408536 78 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 RPL32P35-201ENST00000415214 394 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AL353621.1-201ENST00000418219 243 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AC098831.1-201ENST00000440661 216 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AL583843.1-201ENST00000456070 346 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AC104472.2-201ENST00000469035 601 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 RNA5SP380-201ENST00000517190 98 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AC022634.1-201ENST00000520765 532 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 MTND4P7-201ENST00000523876 130 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 DNAJC8P1-201ENST00000554535 372 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AL138976.2-201ENST00000563989 694 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AC106782.4-201ENST00000568264 210 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 MIR5583-1-201ENST00000580941 59 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AC073539.2-201ENST00000597113 165 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 DISC2.1-201ENST00000612827 205 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 AL160394.1-201ENST00000624765 724 ntBASIC3□□□□□ -1.93
SLC6A13Q9NSD5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
SLC6A13Q9NSD5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 Y_RNA.38-201ENST00000362617 102 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-451P-201ENST00000362921 107 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 Y_RNA.89-201ENST00000363031 102 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 RNA5SP139-201ENST00000364340 117 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 Y_RNA.256-201ENST00000364594 104 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 Y_RNA.453-201ENST00000384223 109 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 MIR183-201ENST00000384958 110 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 SNORA16.2-201ENST00000390991 127 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 SNORD70.1-201ENST00000391007 85 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-1068P-201ENST00000410958 103 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 Y_RNA.623-201ENST00000411128 95 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 SNRPEP10-201ENST00000420249 274 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 AC005300.1-201ENST00000428401 373 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 RPS15AP5-201ENST00000436276 388 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 FGF7P6-202ENST00000451282 293 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 RN7SL293P-201ENST00000481765 281 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 RPL38P4-201ENST00000502376 214 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 RNU2-69P-201ENST00000516061 100 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms