Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AC009961.2-201ENST00000435771 251 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 RPS27AP8-201ENST00000452665 445 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 AC119751.5-201ENST00000514077 770 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 SCARNA24.1-201ENST00000516465 137 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 RPPH1-2P-201ENST00000516688 293 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 BTF3P12-201ENST00000519620 469 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 AC078814.3-201ENST00000553036 491 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 NRBF2P1-201ENST00000587407 859 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 CLIC4P2-201ENST00000601934 717 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 AL356280.1-201ENST00000603614 379 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 AL022154.1-201ENST00000604698 785 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 AC090578.1-201ENST00000604955 591 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 AC110994.2-201ENST00000635481 492 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 AC080128.1-201ENST00000474389 1917 ntBASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.97□□□□□ -2.09
CCL28Q9NRJ3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 U3.4-201ENST00000363352 213 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 RNU6-169P-201ENST00000365336 107 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 RNU1-109P-201ENST00000383960 147 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 RNU6-166P-201ENST00000384371 107 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 RNU6-19P-201ENST00000384718 107 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 MIR34A-201ENST00000385130 110 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 MIR147B-201ENST00000390185 80 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 U3.37-201ENST00000408528 213 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AF274854.1-201ENST00000413236 615 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 MTATP6P17-201ENST00000431030 672 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 MTND1P26-201ENST00000440488 538 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 RPL23AP20-201ENST00000447965 421 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 GAPDHP17-201ENST00000449858 1001 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AL121769.1-201ENST00000469473 401 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC108043.1-201ENST00000512696 574 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 RNU6-581P-201ENST00000516214 105 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 SNORA31.11-201ENST00000516528 139 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AP002453.2-201ENST00000533503 320 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 ADI1P3-201ENST00000549509 470 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC087883.1-201ENST00000551882 391 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC008121.1-201ENST00000603244 268 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AL590229.1-201ENST00000603497 542 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC067747.1-201ENST00000608026 250 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC024940.5-201ENST00000622889 474 ntBASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCL28Q9NRJ3 AC005336.3-201ENST00000623833 2679 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC135776.4-201ENST00000624300 1904 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 MTND5P30-201ENST00000452896 1731 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 VTRNA1-1-201ENST00000363120 99 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 RNU6-898P-201ENST00000365627 104 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 SNORA75B-201ENST00000384053 137 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 MIR128-1-201ENST00000384921 82 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 CISD1P1-201ENST00000393907 327 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 RNU6-248P-201ENST00000410720 107 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 RNU6-195P-201ENST00000411352 109 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 RPL19P1-201ENST00000411635 428 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AL160275.3-201ENST00000423876 471 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 ISCA1P6-201ENST00000427740 390 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 MICF-203ENST00000432679 129 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC107083.1-201ENST00000439643 279 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms