Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.56□□□□□ -2
HPS4Q9NQG7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
HPS4Q9NQG7 RNU6-703P-201ENST00000516946 107 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 RNA5SP337-201ENST00000517007 109 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AC011979.2-201ENST00000527568 352 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AC022878.1-201ENST00000530684 149 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AP003122.4-201ENST00000530980 758 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.56□□□□□ -2
HPS4Q9NQG7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.56□□□□□ -2
HPS4Q9NQG7 MIR3117-201ENST00000584034 78 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
HPS4Q9NQG7 AC112191.3-201ENST00000604371 277 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.56□□□□□ -2
HPS4Q9NQG7 AL365204.3-201ENST00000612448 685 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AC091931.1-201ENST00000623488 728 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.55□□□□□ -2
HPS4Q9NQG7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HPS4Q9NQG7 RNU6-960P-201ENST00000364056 120 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.55□□□□□ -2
HPS4Q9NQG7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 RNU6-443P-201ENST00000384780 107 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.55□□□□□ -2
HPS4Q9NQG7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.55□□□□□ -2
HPS4Q9NQG7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
HPS4Q9NQG7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.55□□□□□ -2
HPS4Q9NQG7 AL592045.1-201ENST00000429867 352 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 MTND4P4-201ENST00000439033 1366 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 RPS29P21-201ENST00000496272 170 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 AC093534.1-201ENST00000504977 132 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 AC234781.5-201ENST00000508429 271 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.55□□□□□ -2
HPS4Q9NQG7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.55□□□□□ -2
HPS4Q9NQG7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 BTF3P12-201ENST00000519620 469 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.55□□□□□ -2
HPS4Q9NQG7 HMGN1P30-201ENST00000589286 268 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.55□□□□□ -2
HPS4Q9NQG7 AC012065.4-201ENST00000602445 679 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 BNIP3P9-201ENST00000603714 553 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 AC121247.2-201ENST00000604776 136 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 AC007938.3-201ENST00000604965 623 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.55□□□□□ -2
HPS4Q9NQG7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 AC010329.5-201ENST00000623497 2174 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 MIR3974-201ENST00000637126 96 ntBASIC2.55□□□□□ -2
HPS4Q9NQG7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.55□□□□□ -2
HPS4Q9NQG7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HPS4Q9NQG7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
HPS4Q9NQG7 RNU1-100P-201ENST00000365255 165 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 MRPL42P2-201ENST00000403169 426 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AC090960.1-201ENST00000421072 306 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AL353729.1-201ENST00000425044 720 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AL589872.1-201ENST00000426602 288 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 MTND2P22-201ENST00000444325 1033 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 HIGD1AP2-201ENST00000446367 280 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 DPPA3P1-201ENST00000448050 469 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.54□□□□□ -2
HPS4Q9NQG7 AC107626.1-201ENST00000471084 183 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 RPL23AP45-201ENST00000476406 468 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.54□□□□□ -2
HPS4Q9NQG7 AC098591.2-201ENST00000510152 315 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.54□□□□□ -2
HPS4Q9NQG7 RNU6-143P-201ENST00000516942 93 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 CKS1BP7-201ENST00000522230 235 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.54□□□□□ -2
HPS4Q9NQG7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.54□□□□□ -2
HPS4Q9NQG7 AC023824.2-201ENST00000566185 400 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.54□□□□□ -2
HPS4Q9NQG7 MIR548AB-201ENST00000584917 84 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AL355598.1-201ENST00000604169 202 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AC012360.2-201ENST00000609349 391 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AC245884.12-201ENST00000615364 59 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
HPS4Q9NQG7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.54□□□□□ -2
HPS4Q9NQG7 MTND5P42-201ENST00000637720 498 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 AC099654.13-201ENST00000639774 207 ntBASIC2.54□□□□□ -2
HPS4Q9NQG7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
HPS4Q9NQG7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.54□□□□□ -2
HPS4Q9NQG7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
HPS4Q9NQG7 AC010889.1-201ENST00000566193 2666 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 NACAP2-201ENST00000318548 624 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 RNU6-188P-201ENST00000364207 107 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 RNU6-946P-201ENST00000383878 107 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 SNORD116-2-201ENST00000384274 95 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 RNU6-658P-201ENST00000384606 106 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 SNORD116-6-201ENST00000384711 96 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 RN7SKP223-201ENST00000410582 62 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 RN7SKP192-201ENST00000411291 327 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.53□□□□□ -2
HPS4Q9NQG7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.53□□□□□ -2
HPS4Q9NQG7 AC119618.1-201ENST00000434191 222 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.53□□□□□ -2
HPS4Q9NQG7 MTATP6P7-201ENST00000453315 681 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.53□□□□□ -2
HPS4Q9NQG7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.53□□□□□ -2
HPS4Q9NQG7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms