Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNA5SP210-201ENST00000391034 120 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 RPL5P18-201ENST00000406671 891 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 RNU2-37P-201ENST00000410695 177 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 RNU6-1068P-201ENST00000410958 103 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 RNU6-387P-201ENST00000411331 105 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 Z85995.1-201ENST00000415547 335 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AC006946.1-201ENST00000429106 328 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AL356867.1-201ENST00000429623 299 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AC107083.1-201ENST00000439643 279 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 MTATP6P23-201ENST00000440153 476 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 MTCO3P18-201ENST00000440206 761 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 CYCSP32-201ENST00000440548 321 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 CALM1P1-201ENST00000442082 433 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 MTND1P18-201ENST00000448191 573 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AL118520.1-201ENST00000450770 291 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX2Q9NPC8 RPL21P104-201ENST00000464143 478 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 RPS20P22-201ENST00000473700 357 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 RPL31P60-201ENST00000478450 367 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 RN7SL499P-201ENST00000481141 276 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX2Q9NPC8 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX2Q9NPC8 RNA5SP282-201ENST00000516355 108 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 RNA5SP367-201ENST00000516557 118 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 RNU6-677P-201ENST00000516914 101 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX2Q9NPC8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX2Q9NPC8 MTCO3P13-201ENST00000577757 781 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AC008521.1-201ENST00000587471 187 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 AC002545.1-201ENST00000592511 181 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 uc_338.11-201ENST00000619132 160 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 MIR3662-201ENST00000637030 95 ntBASIC2.84□□□□□ -1.95
SIX2Q9NPC8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.84□□□□□ -1.96
SIX2Q9NPC8 MAPK10-362ENST00000641864 4484 ntBASIC2.84□□□□□ -1.96
SIX2Q9NPC8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SIX2Q9NPC8 AL354685.2-201ENST00000448218 1447 ntBASIC2.84□□□□□ -1.96
SIX2Q9NPC8 AC008568.2-201ENST00000623862 2313 ntBASIC2.84□□□□□ -1.96
SIX2Q9NPC8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 Y_RNA.88-201ENST00000363029 99 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 MIR9-1-201ENST00000385198 89 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 RNU6-903P-201ENST00000391270 109 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 FGF7P8-201ENST00000402994 292 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 RNU2-29P-201ENST00000410423 189 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 OR9R1P-201ENST00000412200 877 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC092809.3-201ENST00000415453 231 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 SAR1AP4-201ENST00000429225 591 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC105272.1-201ENST00000438604 198 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC011816.1-201ENST00000441346 546 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 RPS3AP12-201ENST00000443616 753 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 CBWD4P-201ENST00000445695 655 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 MTND4P18-201ENST00000447010 465 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 FABP5P13-201ENST00000452144 328 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 HMGN2P16-201ENST00000456802 261 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC087588.1-201ENST00000462203 316 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 RBBP4P6-201ENST00000508098 202 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC104806.1-201ENST00000508720 308 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 RNU6-123P-201ENST00000516163 102 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 RNU6-358P-201ENST00000516564 75 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 RNU6-685P-201ENST00000517088 95 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AP005205.1-201ENST00000563503 508 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 MTCO3P24-201ENST00000572729 782 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 NRBF2P5-201ENST00000603087 788 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC013553.2-201ENST00000604244 589 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 RMST_3.1-201ENST00000611651 109 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 DISC2.1-201ENST00000612827 205 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC130324.3-201ENST00000614165 542 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC034102.8-201ENST00000615146 484 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AL137790.1-201ENST00000634283 177 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC024614.3-201ENST00000637860 256 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 AC099654.14-201ENST00000638599 341 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SIX2Q9NPC8 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.83□□□□□ -1.96
SIX2Q9NPC8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SIX2Q9NPC8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SIX2Q9NPC8 MTND5P7-201ENST00000413558 1798 ntBASIC2.82□□□□□ -1.96
SIX2Q9NPC8 AC092435.3-201ENST00000565538 3654 ntBASIC2.82□□□□□ -1.96
SIX2Q9NPC8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SIX2Q9NPC8 RNU6-288P-201ENST00000363690 104 ntBASIC2.82□□□□□ -1.96
SIX2Q9NPC8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SIX2Q9NPC8 MIR493-201ENST00000385254 89 ntBASIC2.82□□□□□ -1.96
SIX2Q9NPC8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SIX2Q9NPC8 RPL30P16-201ENST00000419341 429 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms