Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU6-1179P-201ENST00000384667 107 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 RPS4XP7-201ENST00000406274 780 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 AL591034.1-201ENST00000407447 340 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 VN1R36P-201ENST00000414936 291 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.96□□□□□ -1.78
VTA1Q9NP79 CECR9-201ENST00000453421 199 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.96□□□□□ -1.78
VTA1Q9NP79 RNU7-170P-201ENST00000459303 61 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.96□□□□□ -1.78
VTA1Q9NP79 AC069499.1-201ENST00000489433 509 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 AC022493.1-201ENST00000492984 337 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.96□□□□□ -1.78
VTA1Q9NP79 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.96□□□□□ -1.78
VTA1Q9NP79 MIR892C-201ENST00000516410 77 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 RNA5SP165-201ENST00000517142 115 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 SCOCP1-201ENST00000554676 349 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.96□□□□□ -1.78
VTA1Q9NP79 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.96□□□□□ -1.78
VTA1Q9NP79 MIR5692C1-201ENST00000585309 91 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.96□□□□□ -1.78
VTA1Q9NP79 AC113139.1-201ENST00000605049 239 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 AC004805.2-201ENST00000605382 482 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 AC005000.2-201ENST00000605468 310 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 YPEL5P2-201ENST00000605553 359 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 ATP5A1P2-202ENST00000616464 443 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 AC005858.4-201ENST00000623191 700 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 AC112487.2-201ENST00000637950 304 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VTA1Q9NP79 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VTA1Q9NP79 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.96□□□□□ -1.78
VTA1Q9NP79 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VTA1Q9NP79 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VTA1Q9NP79 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VTA1Q9NP79 AL356274.2-201ENST00000624379 3752 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VTA1Q9NP79 AC066616.2-201ENST00000559334 1481 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VTA1Q9NP79 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VTA1Q9NP79 SNORA38.1-201ENST00000364172 131 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 RNU6-266P-201ENST00000364225 107 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 RNU6-214P-201ENST00000384130 107 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 Y_RNA.509-201ENST00000384506 99 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 U3.39-201ENST00000408569 239 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 AC074085.1-201ENST00000413598 418 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.95□□□□□ -1.78
VTA1Q9NP79 AL627311.1-201ENST00000431514 115 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 MYL8P-204ENST00000431574 518 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.95□□□□□ -1.78
VTA1Q9NP79 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.95□□□□□ -1.78
VTA1Q9NP79 RNU7-138P-201ENST00000459479 64 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 RNU6-566P-201ENST00000516790 107 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 SNORA25.17-201ENST00000517184 124 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 CASP1P1-201ENST00000526345 212 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 AC011602.1-201ENST00000546484 331 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.95□□□□□ -1.78
VTA1Q9NP79 AC007151.1-201ENST00000572774 483 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 AP000787.2-201ENST00000604432 568 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 FTX_3.1-201ENST00000610451 147 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 MIR486-1-201ENST00000612171 68 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.95□□□□□ -1.78
VTA1Q9NP79 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.95□□□□□ -1.78
VTA1Q9NP79 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.95□□□□□ -1.78
VTA1Q9NP79 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.95□□□□□ -1.78
VTA1Q9NP79 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VTA1Q9NP79 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.95□□□□□ -1.78
VTA1Q9NP79 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.94□□□□□ -1.78
VTA1Q9NP79 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.94□□□□□ -1.78
VTA1Q9NP79 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VTA1Q9NP79 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VTA1Q9NP79 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VTA1Q9NP79 Y_RNA.135-201ENST00000363439 95 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 Y_RNA.431-201ENST00000384086 102 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 Y_RNA.535-201ENST00000384612 99 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 NDUFB4P4-201ENST00000404822 243 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.94□□□□□ -1.78
VTA1Q9NP79 UBE2D3P2-201ENST00000424409 445 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 AL359672.1-201ENST00000442302 409 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 ANP32BP2-201ENST00000454525 545 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 RN7SL594P-201ENST00000470590 287 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.94□□□□□ -1.78
VTA1Q9NP79 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.94□□□□□ -1.78
VTA1Q9NP79 MTND3P25-201ENST00000509243 135 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 Y_RNA.675-201ENST00000516389 149 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 IGKV2-26-201ENST00000518305 343 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VTA1Q9NP79 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.94□□□□□ -1.78
VTA1Q9NP79 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.94□□□□□ -1.78
VTA1Q9NP79 MIR3672-201ENST00000584290 82 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 MIR3942-201ENST00000585264 109 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 KLKP1-201ENST00000595979 403 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 AL121757.2-201ENST00000611223 313 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 MIR6076-201ENST00000617521 113 ntBASIC3.94□□□□□ -1.78
VTA1Q9NP79 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VTA1Q9NP79 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VTA1Q9NP79 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VTA1Q9NP79 SNORD116-11-201ENST00000383882 92 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 Y_RNA.387-201ENST00000383918 102 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 SNORA40C-201ENST00000391285 128 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 MIR888-201ENST00000401186 77 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms