Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 U8.22-201ENST00000459141 133 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 SCARNA10-201ENST00000459255 330 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 AC008897.1-201ENST00000494006 347 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 SNORD116-28-201ENST00000516123 91 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 RNA5SP471-201ENST00000516971 106 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 MTND5P41-201ENST00000517498 206 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 RPL21P7-201ENST00000557463 483 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 AC090617.3-201ENST00000573670 475 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 RN7SL52P-201ENST00000584271 284 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.91□□□□□ -1.78
GCM1Q9NP62 AL078605.1-201ENST00000603529 500 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 RN7SL722P-201ENST00000617780 284 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 RN7SL565P-201ENST00000618246 284 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 MIR7703-201ENST00000620784 77 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 AC091953.5-201ENST00000622919 233 ntBASIC3.91□□□□□ -1.78
GCM1Q9NP62 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
GCM1Q9NP62 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.91□□□□□ -1.78
GCM1Q9NP62 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
GCM1Q9NP62 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.91□□□□□ -1.78
GCM1Q9NP62 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
GCM1Q9NP62 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
GCM1Q9NP62 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
GCM1Q9NP62 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
GCM1Q9NP62 MFSD8-216ENST00000641147 4009 ntBASIC3.9□□□□□ -1.78
GCM1Q9NP62 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.9□□□□□ -1.78
GCM1Q9NP62 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
GCM1Q9NP62 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
GCM1Q9NP62 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
GCM1Q9NP62 RNU6-227P-201ENST00000362865 103 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 Y_RNA.233-201ENST00000364407 101 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 RNA5SP505-201ENST00000364748 108 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 Y_RNA.383-201ENST00000383855 97 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 RNU2-51P-201ENST00000410708 197 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 RNU6-394P-201ENST00000410735 107 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 TMSB10P2-201ENST00000416049 131 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 AC244098.2-201ENST00000422068 99 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 HMGN2P21-201ENST00000447764 270 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 AL162591.2-201ENST00000449634 317 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 RPS29P27-201ENST00000463711 170 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 RNA5SP464-201ENST00000516251 108 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 RNU2-31P-201ENST00000516954 155 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 RAB9BP1-201ENST00000519581 626 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 AP004371.1-201ENST00000525240 214 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 SNRPGP15-201ENST00000600149 222 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 MIR6820-201ENST00000611508 62 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 AC011476.5-201ENST00000615594 130 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
GCM1Q9NP62 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
GCM1Q9NP62 AL133243.3-201ENST00000617415 3004 ntBASIC3.9□□□□□ -1.79
GCM1Q9NP62 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
GCM1Q9NP62 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
GCM1Q9NP62 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
GCM1Q9NP62 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
GCM1Q9NP62 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.9□□□□□ -1.79
GCM1Q9NP62 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.89□□□□□ -1.79
GCM1Q9NP62 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
GCM1Q9NP62 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
GCM1Q9NP62 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GCM1Q9NP62 Y_RNA.8-201ENST00000362353 102 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 RNU6-1301P-201ENST00000362724 104 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 RNU1-83P-201ENST00000363426 164 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 RNU6-335P-201ENST00000364563 113 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 RNU6-1035P-201ENST00000384477 107 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
GCM1Q9NP62 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.89□□□□□ -1.79
GCM1Q9NP62 AL358453.1-201ENST00000422522 250 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 AL358472.1-201ENST00000431295 329 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 AC011753.3-201ENST00000443436 406 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 TDGF1P1-201ENST00000445734 527 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 RPS29P33-201ENST00000456717 146 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 AC084851.1-201ENST00000529105 249 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 MRPS18CP4-201ENST00000535821 231 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 AC027288.2-201ENST00000553028 243 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.89□□□□□ -1.79
GCM1Q9NP62 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.89□□□□□ -1.79
GCM1Q9NP62 MIR4330-201ENST00000579077 105 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 AC234771.5-201ENST00000600161 514 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 AC008121.1-201ENST00000603244 268 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 AL139395.1-201ENST00000603662 160 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 SNORD113-5-201ENST00000607261 78 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 AL161629.2-201ENST00000615347 275 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 AL365265.1-201ENST00000621045 234 ntBASIC3.89□□□□□ -1.79
GCM1Q9NP62 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.89□□□□□ -1.79
GCM1Q9NP62 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.89□□□□□ -1.79
GCM1Q9NP62 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.89□□□□□ -1.79
GCM1Q9NP62 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms