Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 AL357552.1-201ENST00000445254 415 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 HMGN2P21-201ENST00000447764 270 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 MTND5P22-201ENST00000458380 195 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 Y_RNA.635-201ENST00000459041 101 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 AC126389.1-201ENST00000477436 290 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 MTCO1P29-201ENST00000496868 288 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 PTP4A1P4-201ENST00000512479 322 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 AC093303.1-201ENST00000514549 295 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 RNA5SP341-201ENST00000516261 117 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 RNU2-10P-201ENST00000516375 211 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 RNU6-273P-201ENST00000516937 96 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 AC103783.1-201ENST00000520506 373 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 COX6CP5-201ENST00000527162 228 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 MIR4503-201ENST00000582187 83 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 VN1R107P-201ENST00000601784 209 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 SCARNA15.3-201ENST00000626315 122 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 SCARNA4.1-201ENST00000628597 123 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 AL365361.1-201ENST00000566942 3481 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 AC244517.1-201ENST00000606030 2086 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 MTND4P1-201ENST00000457501 1466 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 TAB3P1-202ENST00000452645 1634 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 MIR148B-201ENST00000362252 99 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 RNU6-263P-201ENST00000363811 107 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 RNU6-639P-201ENST00000384074 107 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 RNU6-1029P-201ENST00000384109 107 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 MT-TR-201ENST00000387439 65 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 UBA52P6-201ENST00000399822 382 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 MTCYBP4-201ENST00000401524 249 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 RNU4-47P-201ENST00000410876 114 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 RNU6-370P-201ENST00000411008 104 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 MED13P1-201ENST00000428342 171 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC108059.2-201ENST00000434626 151 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AL137792.2-201ENST00000443484 235 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 HMGN1P18-201ENST00000457642 277 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 RPL7P43-201ENST00000478876 753 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC006445.1-201ENST00000491925 405 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC135721.1-201ENST00000497954 479 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 RNU6-1095P-201ENST00000516148 108 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 SNORA64.4-201ENST00000516632 81 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC022634.1-201ENST00000520765 532 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC104027.1-201ENST00000521887 300 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AP004242.1-201ENST00000533701 349 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC018630.1-201ENST00000541376 925 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 HIGD1AP1-201ENST00000550979 275 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC006006.1-201ENST00000603082 144 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC124312.5-201ENST00000604451 268 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC007938.3-201ENST00000604965 623 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AL137843.1-201ENST00000605078 385 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AP000654.2-201ENST00000605633 586 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC073657.2-201ENST00000605661 303 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 AC092807.2-201ENST00000609367 243 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 MIR6130-201ENST00000619419 109 ntBASIC3.41□□□□□ -1.86
EBF3Q9H4W6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.41□□□□□ -1.86
EBF3Q9H4W6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
EBF3Q9H4W6 USP8P1-201ENST00000494673 3183 ntBASIC3.4□□□□□ -1.86
EBF3Q9H4W6 RNU6-1252P-201ENST00000363054 104 ntBASIC3.4□□□□□ -1.87
EBF3Q9H4W6 RNU6-432P-201ENST00000384196 109 ntBASIC3.4□□□□□ -1.87
EBF3Q9H4W6 RNU6-331P-201ENST00000384724 107 ntBASIC3.4□□□□□ -1.87
EBF3Q9H4W6 RNU6-837P-201ENST00000391056 108 ntBASIC3.4□□□□□ -1.87
EBF3Q9H4W6 AL606923.1-201ENST00000406616 190 ntBASIC3.4□□□□□ -1.87
EBF3Q9H4W6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.4□□□□□ -1.87
EBF3Q9H4W6 RN7SKP158-201ENST00000410453 326 ntBASIC3.4□□□□□ -1.87
EBF3Q9H4W6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.4□□□□□ -1.87
EBF3Q9H4W6 AC245291.1-201ENST00000419501 328 ntBASIC3.4□□□□□ -1.87
EBF3Q9H4W6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.4□□□□□ -1.87
EBF3Q9H4W6 OR2AS1P-201ENST00000427827 319 ntBASIC3.4□□□□□ -1.87
EBF3Q9H4W6 MTND5P27-201ENST00000428871 1720 ntBASIC3.4□□□□□ -1.87
EBF3Q9H4W6 AC005094.1-201ENST00000440420 368 ntBASIC3.4□□□□□ -1.87
EBF3Q9H4W6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms