Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 MIR325-201ENST00000385260 98 ntBASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 HSPE1P25-201ENST00000455484 251 ntBASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 snoU13.20-201ENST00000459180 104 ntBASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 AC108022.1-201ENST00000493466 478 ntBASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 CBX3P4-201ENST00000538909 354 ntBASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 MIR3934-201ENST00000579806 107 ntBASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 MIR4480-201ENST00000582492 71 ntBASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 AC024153.1-201ENST00000603103 365 ntBASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 MAPK10-263ENST00000641052 4307 ntBASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BHLHE41Q9C0J9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 RNU6-541P-201ENST00000384709 110 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AC017079.2-201ENST00000416102 485 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 RNU7-120P-201ENST00000459334 63 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 RPL7P49-201ENST00000471402 708 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 RPS29P22-201ENST00000472363 168 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AP000870.1-201ENST00000472927 406 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AC083982.1-201ENST00000485679 344 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 RNU6-1183P-201ENST00000517054 60 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 CYCSP39-201ENST00000565821 309 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 MIR3133-201ENST00000583157 78 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 SNORD113-5-201ENST00000607261 78 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AL672167.1-203ENST00000641299 2975 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 AL353743.1-202ENST00000431724 1695 ntBASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHE41Q9C0J9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BHLHE41Q9C0J9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BHLHE41Q9C0J9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
BHLHE41Q9C0J9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BHLHE41Q9C0J9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
BHLHE41Q9C0J9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BHLHE41Q9C0J9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BHLHE41Q9C0J9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
BHLHE41Q9C0J9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
BHLHE41Q9C0J9 RNU1-20P-201ENST00000363314 162 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 RPS4XP3-201ENST00000398541 413 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 RN7SKP267-201ENST00000410381 285 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 AC009237.10-201ENST00000414112 510 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 AC005002.2-201ENST00000438228 269 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 AC087477.1-201ENST00000465747 340 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 AC107393.1-201ENST00000512403 346 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 RNU6-1114P-201ENST00000516022 107 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 Y_RNA.703-201ENST00000516846 111 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 AC090281.1-201ENST00000523019 276 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 AC087441.2-201ENST00000529141 262 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 LINC00933-203ENST00000559812 219 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 MIR3910-1-201ENST00000580936 111 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 AC091178.1-203ENST00000584586 279 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 RPL7P50-201ENST00000600588 727 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.4□□□□□ -1.71
BHLHE41Q9C0J9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms