Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RNU6-393P-201ENST00000384475 107 ntBASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 NDUFS5P4-201ENST00000412983 318 ntBASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 BRK1P2-201ENST00000442875 223 ntBASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 MTATP6P7-201ENST00000453315 681 ntBASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 AL163153.1-201ENST00000554223 283 ntBASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 H3F3AP1-201ENST00000559984 334 ntBASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 AC010338.1-201ENST00000621823 717 ntBASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
RTFDC1Q9BY42 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RTFDC1Q9BY42 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
RTFDC1Q9BY42 Y_RNA.157-201ENST00000363638 102 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 RNU6-1068P-201ENST00000410958 103 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 EEF1A1P40-201ENST00000412883 573 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 AC007390.1-201ENST00000415722 356 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 RPL7P10-201ENST00000417407 739 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 SCARNA18-201ENST00000459004 134 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 AP002884.2-201ENST00000471647 395 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 FAM92A1P2-202ENST00000504766 877 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 RNU6-928P-201ENST00000516876 104 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 AC107934.2-201ENST00000518653 310 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 SUB1P1-201ENST00000524415 382 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 AL133241.1-201ENST00000556832 487 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 AL138976.2-201ENST00000563989 694 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 U2.17-201ENST00000611454 95 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 XIST_intron.1-201ENST00000619444 68 ntBASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTFDC1Q9BY42 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 Y_RNA.231-201ENST00000364358 102 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 RNU4-66P-201ENST00000365199 138 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 RNU6-715P-201ENST00000365204 103 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 Y_RNA.399-201ENST00000383955 105 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AL139039.1-201ENST00000401900 692 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 OR9R1P-201ENST00000412200 877 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AL356968.1-201ENST00000416622 474 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AC009161.1-201ENST00000417306 376 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AC099548.1-201ENST00000421443 426 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AC098614.2-201ENST00000426040 255 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 RPL12P25-201ENST00000455592 494 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 RPL26P9-201ENST00000457466 433 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 CENPBD1P1-201ENST00000464061 469 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 HMGN2P13-201ENST00000476476 274 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 MIR2276-201ENST00000516886 89 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 RNU6-711P-201ENST00000517255 106 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AP000867.2-201ENST00000532468 320 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 MIR3162-201ENST00000581818 82 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 MIR4424-201ENST00000585257 86 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AL645944.1-201ENST00000603857 493 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AL020991.1-201ENST00000612314 373 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 MIR3662-201ENST00000637030 95 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 AC004944.1-201ENST00000517807 3059 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 SRP72P2-201ENST00000344851 1979 ntBASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RTFDC1Q9BY42 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTFDC1Q9BY42 Y_RNA.480-201ENST00000384364 102 ntBASIC3.88□□□□□ -1.79
RTFDC1Q9BY42 RNU6-45P-201ENST00000384471 107 ntBASIC3.88□□□□□ -1.79
RTFDC1Q9BY42 RNU6-1127P-201ENST00000384580 107 ntBASIC3.88□□□□□ -1.79
RTFDC1Q9BY42 EI24P2-201ENST00000397776 1076 ntBASIC3.88□□□□□ -1.79
RTFDC1Q9BY42 MTND1P23-201ENST00000416931 372 ntBASIC3.88□□□□□ -1.79
RTFDC1Q9BY42 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.88□□□□□ -1.79
RTFDC1Q9BY42 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.88□□□□□ -1.79
RTFDC1Q9BY42 NDUFB1P2-201ENST00000449477 176 ntBASIC3.88□□□□□ -1.79
RTFDC1Q9BY42 RPL23AP14-201ENST00000468281 468 ntBASIC3.88□□□□□ -1.79
RTFDC1Q9BY42 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms