Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC009237.15-201ENST00000610252 501 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 MIR7843-201ENST00000622274 79 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.84□□□□□ -2.28
LIMD2Q9BT23 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
LIMD2Q9BT23 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 RNU6-661P-201ENST00000362409 107 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 RNU6-1167P-201ENST00000363227 94 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 RNU1-23P-201ENST00000363361 144 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 RNU1-57P-201ENST00000384491 166 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 RN7SKP284-201ENST00000411002 343 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 TPMTP2-201ENST00000414372 726 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 USP9YP26-201ENST00000421008 661 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 TOMM20P4-201ENST00000427861 435 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL121890.1-201ENST00000435457 205 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 ARPC3P5-201ENST00000448802 534 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 MRPL42P4-201ENST00000453267 443 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AC099513.1-201ENST00000490423 301 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 SNORA48.9-201ENST00000516419 162 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 CYCSP27-201ENST00000527643 293 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL353997.4-201ENST00000586196 166 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL670379.6-201ENST00000603753 252 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL670379.11-201ENST00000604059 253 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL670379.10-201ENST00000604330 253 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL161798.1-201ENST00000604630 131 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AC008162.1-201ENST00000604718 254 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL670379.1-201ENST00000604752 252 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL670379.2-201ENST00000604983 252 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL670379.5-201ENST00000605253 252 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL670379.4-201ENST00000605279 254 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL670379.12-201ENST00000605291 253 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL670379.8-201ENST00000605353 252 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL670379.9-201ENST00000605428 253 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL670379.7-201ENST00000605823 252 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 MIR6134-201ENST00000617606 109 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL445264.1-201ENST00000621719 171 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AL157770.1-201ENST00000623049 439 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AP003476.1-201ENST00000623984 516 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 AC091965.5-201ENST00000624785 342 ntBASIC0.83□□□□□ -2.28
LIMD2Q9BT23 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
LIMD2Q9BT23 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 RNU6-792P-201ENST00000363490 107 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 RNU6-60P-201ENST00000364792 103 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 RNU6-611P-201ENST00000384276 104 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AL139397.2-201ENST00000404529 772 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC078974.1-201ENST00000411597 223 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 TRIM60P13-201ENST00000432350 1283 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC010153.1-201ENST00000432862 727 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AL354941.1-201ENST00000438600 464 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 RPS15AP9-201ENST00000439856 381 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC020550.1-201ENST00000447385 163 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC245102.2-201ENST00000448956 180 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 SNORD13-201ENST00000459299 104 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 OR2A41P-201ENST00000473586 105 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 MTND5P13-201ENST00000513046 1079 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC023632.1-201ENST00000518463 375 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AP001189.2-201ENST00000527320 189 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.82□□□□□ -2.28
LIMD2Q9BT23 RRN3P3-201ENST00000549207 578 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC015720.1-201ENST00000565251 277 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC023825.1-201ENST00000566704 1030 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 MIR4422-201ENST00000581938 83 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 NDUFA8P1-201ENST00000605525 367 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC008759.3-201ENST00000613300 508 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 AC120349.2-201ENST00000625002 298 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 ZNF209P-201ENST00000593450 2304 ntBASIC0.82□□□□□ -2.28
LIMD2Q9BT23 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.81□□□□□ -2.28
LIMD2Q9BT23 RNU6-939P-201ENST00000384634 107 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 MIR1261-201ENST00000408659 82 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 RNU2-36P-201ENST00000410361 191 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 RNA5SP501-201ENST00000410990 112 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 RNU2-41P-201ENST00000410991 178 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms