Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 FO393413.1-201ENST00000402892 195 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 MIR1302-8-201ENST00000408342 128 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AL161651.1-201ENST00000440882 223 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 KATNBL1P3-201ENST00000443475 909 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AL078601.1-201ENST00000444542 271 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 MTCYBP1-201ENST00000454315 1119 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 RNU6-956P-201ENST00000458868 103 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 RNU6-123P-201ENST00000516163 102 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AP001646.1-201ENST00000527936 915 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AP000873.5-201ENST00000533906 236 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 LINC00933-203ENST00000559812 219 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AC103810.1-201ENST00000579873 453 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AC098848.2-201ENST00000588023 330 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 OR1M4P-201ENST00000589199 287 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 MIR98-201ENST00000606724 119 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AC072046.2-201ENST00000618366 268 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AC024940.5-201ENST00000622889 474 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 MTND5P17-201ENST00000418405 1603 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 CDC27P3-201ENST00000635418 1910 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 RNU6-1180P-201ENST00000364935 107 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 SET-203ENST00000372688 801 ntTSL 2 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 SNORD116-9-201ENST00000384000 95 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 SNORD116-3-201ENST00000384287 95 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 RNU6-166P-201ENST00000384371 107 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 SNORD116-7-201ENST00000384404 95 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 SNORD116-5-201ENST00000384462 95 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 MIR196B-201ENST00000384852 84 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 MIR592-201ENST00000384959 97 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 RNU2-52P-201ENST00000410680 190 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AL160275.3-201ENST00000423876 471 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AL109933.2-201ENST00000452651 260 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 MIR3162-201ENST00000581818 82 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC008521.1-201ENST00000587471 187 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC091152.3-201ENST00000604227 325 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AL158032.1-201ENST00000605401 106 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC025034.2-201ENST00000623264 286 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AC093648.1-201ENST00000623546 606 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 AL157786.1-207ENST00000627771 695 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 MIR7515-201ENST00000637837 67 ntBASIC3.07□□□□□ -1.92
SDF4Q9BRK5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.07□□□□□ -1.92
SDF4Q9BRK5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDF4Q9BRK5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
SDF4Q9BRK5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
SDF4Q9BRK5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.06□□□□□ -1.92
SDF4Q9BRK5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.06□□□□□ -1.92
SDF4Q9BRK5 RNU6-1083P-201ENST00000384022 107 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 RNU6-74P-201ENST00000384235 107 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 RNU6-348P-201ENST00000384386 107 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 RPL21P75-201ENST00000396599 483 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 RPL21P28-201ENST00000401418 483 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 AL356057.2-201ENST00000403318 432 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 AL592114.1-201ENST00000403842 483 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 BX295541.1-201ENST00000417774 250 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 MTCYBP5-201ENST00000423752 1135 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 ARL5AP4-201ENST00000430731 512 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 AC112220.1-201ENST00000434628 355 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 AP000936.2-201ENST00000447151 681 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 AC108938.1-201ENST00000451204 136 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.06□□□□□ -1.92
SDF4Q9BRK5 RPL21P39-201ENST00000463605 483 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 RPL21P93-201ENST00000480465 489 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 AC087190.1-201ENST00000484462 480 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 AC093591.1-201ENST00000491435 481 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 RPL21P16-201ENST00000495531 483 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.06□□□□□ -1.92
SDF4Q9BRK5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SDF4Q9BRK5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.06□□□□□ -1.92
SDF4Q9BRK5 MTCYBP20-201ENST00000524239 1129 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 AL121821.2-201ENST00000556081 394 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 MIR4672-201ENST00000583126 81 ntBASIC3.06□□□□□ -1.92
SDF4Q9BRK5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms