Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.09□□□□□ -2.07
SCN2AQ99250 PISRT1-201ENST00000626175 531 ntBASIC2.09□□□□□ -2.07
SCN2AQ99250 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.09□□□□□ -2.07
SCN2AQ99250 AC090582.1-201ENST00000636321 199 ntBASIC2.09□□□□□ -2.07
SCN2AQ99250 AC241585.2-209ENST00000638217 143 ntBASIC2.09□□□□□ -2.07
SCN2AQ99250 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.09□□□□□ -2.07
SCN2AQ99250 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SCN2AQ99250 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SCN2AQ99250 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SCN2AQ99250 RNU6-511P-201ENST00000363496 107 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.08□□□□□ -2.08
SCN2AQ99250 MIR888-201ENST00000401186 77 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 RNU6-195P-201ENST00000411352 109 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN2AQ99250 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.08□□□□□ -2.08
SCN2AQ99250 SEPT2P1-201ENST00000419651 180 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 NDUFB4P7-201ENST00000423198 363 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 UBE2D3P2-201ENST00000424409 445 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 SRIP2-201ENST00000428470 166 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC007919.1-201ENST00000429380 217 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.08□□□□□ -2.08
SCN2AQ99250 RPS15AP28-201ENST00000435088 386 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.08□□□□□ -2.08
SCN2AQ99250 HMGB3P12-201ENST00000438745 556 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN2AQ99250 MTND1P27-201ENST00000451117 902 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 RPS26P21-201ENST00000475397 348 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.08□□□□□ -2.08
SCN2AQ99250 RPS15AP36-201ENST00000492022 382 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 RPL30P5-201ENST00000494923 336 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 RNU6-64P-201ENST00000517119 105 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AP000889.2-201ENST00000532684 490 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 ACTR3BP3-201ENST00000565577 979 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN2AQ99250 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.08□□□□□ -2.08
SCN2AQ99250 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.08□□□□□ -2.08
SCN2AQ99250 DUXAP4-201ENST00000603046 613 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC245014.2-201ENST00000603689 287 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AL136363.1-201ENST00000605349 337 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC246785.4-201ENST00000605374 287 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC008945.2-201ENST00000606056 604 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC097468.3-201ENST00000607956 456 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC239868.4-201ENST00000608318 671 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC012360.2-201ENST00000609349 391 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC138749.5-201ENST00000611461 208 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC116165.2-201ENST00000616705 206 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC068831.7-201ENST00000616954 363 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 FRG1KP-201ENST00000623592 341 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SCN2AQ99250 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN2AQ99250 RNA5SP456-201ENST00000364002 114 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 RNU1-91P-201ENST00000364746 163 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SCN2AQ99250 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN2AQ99250 PIGFP2-201ENST00000421400 651 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 RPS27AP8-201ENST00000452665 445 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN2AQ99250 AC093899.1-201ENST00000457984 376 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC013267.1-201ENST00000458227 267 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN2AQ99250 AC112204.1-201ENST00000502591 103 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 SNORA31.3-201ENST00000516029 96 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 Y_RNA.673-201ENST00000516306 88 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 RNA5SP281-201ENST00000516504 135 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 RNU6-1092P-201ENST00000516955 87 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 RNU6-410P-201ENST00000517006 107 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC022616.6-201ENST00000520479 119 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SCN2AQ99250 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN2AQ99250 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN2AQ99250 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.08□□□□□ -2.08
SCN2AQ99250 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
SCN2AQ99250 AC104073.3-201ENST00000610942 955 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 AC092140.2-201ENST00000618027 521 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 MIR1291-201ENST00000627649 87 ntBASIC2.08□□□□□ -2.08
SCN2AQ99250 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
SCN2AQ99250 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCN2AQ99250 RNU6-140P-201ENST00000384566 108 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 RNY3P10-201ENST00000384764 102 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 MIR764-201ENST00000390811 85 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCN2AQ99250 RPS3AP36-201ENST00000398190 775 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AL021407.1-201ENST00000404531 386 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 HMGN1P14-201ENST00000412459 517 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN2AQ99250 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN2AQ99250 ELOCP14-201ENST00000428070 331 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN2AQ99250 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN2AQ99250 ELOCP7-201ENST00000439968 331 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AC009296.1-201ENST00000443146 155 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 MTCYBP1-201ENST00000454315 1119 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 MTAPP1-201ENST00000489154 819 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN2AQ99250 RNU6-390P-201ENST00000516259 103 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms