Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.54□□□□□ -2
ZNF560Q96MR9 USP9YP15-201ENST00000442391 422 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.54□□□□□ -2
ZNF560Q96MR9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.54□□□□□ -2
ZNF560Q96MR9 RNU6-1315P-201ENST00000517187 99 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 AP003467.2-201ENST00000520175 319 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 AC025755.1-201ENST00000521306 278 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 LINC00933-203ENST00000559812 219 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.54□□□□□ -2
ZNF560Q96MR9 AC023824.2-201ENST00000566185 400 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 AC135628.1-201ENST00000568867 534 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 MIR1273C-201ENST00000578669 77 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 AC104237.2-201ENST00000612456 443 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 AC130324.3-201ENST00000614165 542 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 AC009159.2-201ENST00000617603 606 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 AL590808.1-201ENST00000618696 141 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.53□□□□□ -2
ZNF560Q96MR9 MTND4P4-201ENST00000439033 1366 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 RNU6-190P-201ENST00000384154 102 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 RNU6-443P-201ENST00000384780 107 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 RNU4-53P-201ENST00000410828 140 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 OR51A5P-201ENST00000415429 942 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 AL109913.1-201ENST00000421173 514 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.53□□□□□ -2
ZNF560Q96MR9 AL365203.2-201ENST00000423444 196 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.53□□□□□ -2
ZNF560Q96MR9 PTGES3P4-201ENST00000426243 356 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 AL589872.1-201ENST00000426602 288 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.53□□□□□ -2
ZNF560Q96MR9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.53□□□□□ -2
ZNF560Q96MR9 MTND1P30-201ENST00000441241 901 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 UBE2D3P4-201ENST00000441973 436 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 HIGD1AP2-201ENST00000446367 280 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.53□□□□□ -2
ZNF560Q96MR9 AC003071.1-201ENST00000451219 789 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 KATNBL1P6-201ENST00000453433 915 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.53□□□□□ -2
ZNF560Q96MR9 AL121769.1-201ENST00000469473 401 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 AC109486.1-201ENST00000486833 374 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.53□□□□□ -2
ZNF560Q96MR9 AC008413.1-201ENST00000511864 177 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.53□□□□□ -2
ZNF560Q96MR9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.53□□□□□ -2
ZNF560Q96MR9 FABP5P5-201ENST00000515537 406 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 RNU6-572P-201ENST00000516724 80 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 OR4R1P-201ENST00000529879 463 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.53□□□□□ -2
ZNF560Q96MR9 AC105137.2-201ENST00000569073 466 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 ROCK1P1-201ENST00000573767 549 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.53□□□□□ -2
ZNF560Q96MR9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.53□□□□□ -2
ZNF560Q96MR9 AC008121.1-201ENST00000603244 268 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 AC012360.2-201ENST00000609349 391 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
ZNF560Q96MR9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.53□□□□□ -2
ZNF560Q96MR9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ZNF560Q96MR9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2.01
ZNF560Q96MR9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF560Q96MR9 AC080100.1-201ENST00000624239 5356 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 MIR6073-201ENST00000352083 89 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 RNU6-220P-201ENST00000390919 107 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 SNORA40C-201ENST00000391285 128 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 SNORA11.2-201ENST00000408318 127 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 Y_RNA.598-201ENST00000410480 95 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 RNU4-72P-201ENST00000410754 173 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 AC007064.1-201ENST00000412238 351 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 MYL8P-204ENST00000431574 518 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.52□□□□□ -2.01
ZNF560Q96MR9 CR769767.1-201ENST00000436337 346 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.52□□□□□ -2.01
ZNF560Q96MR9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF560Q96MR9 AC133134.1-201ENST00000466800 359 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF560Q96MR9 AC023141.11-201ENST00000508864 202 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF560Q96MR9 SCARNA3-201ENST00000517097 143 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.52□□□□□ -2.01
ZNF560Q96MR9 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF560Q96MR9 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 NRBF2P1-201ENST00000587407 859 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 HMGN1P30-201ENST00000589286 268 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 AC087683.2-201ENST00000611384 326 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 AC099654.13-201ENST00000639774 207 ntBASIC2.52□□□□□ -2.01
ZNF560Q96MR9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
ZNF560Q96MR9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
ZNF560Q96MR9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 RNU2-8P-201ENST00000410727 190 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC005005.2-201ENST00000420779 380 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 MTCO3P30-201ENST00000426425 670 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 RPL23AP30-201ENST00000432419 501 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 TAF9P1-201ENST00000445421 515 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms