Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC008526.1-201ENST00000509149 338 ntBASIC1.93□□□□□ -2.1
C9orf72Q96LT7 MRPS33P3-201ENST00000513456 322 ntBASIC1.93□□□□□ -2.1
C9orf72Q96LT7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.93□□□□□ -2.1
C9orf72Q96LT7 SNORA31.3-201ENST00000516029 96 ntBASIC1.93□□□□□ -2.1
C9orf72Q96LT7 AP000907.2-201ENST00000530827 353 ntBASIC1.93□□□□□ -2.1
C9orf72Q96LT7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.93□□□□□ -2.1
C9orf72Q96LT7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.93□□□□□ -2.1
C9orf72Q96LT7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.93□□□□□ -2.1
C9orf72Q96LT7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.93□□□□□ -2.1
C9orf72Q96LT7 AC078899.2-201ENST00000595282 212 ntBASIC1.93□□□□□ -2.1
C9orf72Q96LT7 AC069431.2-201ENST00000604149 1099 ntBASIC1.93□□□□□ -2.1
C9orf72Q96LT7 AF129408.1-201ENST00000608767 431 ntBASIC1.93□□□□□ -2.1
C9orf72Q96LT7 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.93□□□□□ -2.1
C9orf72Q96LT7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.93□□□□□ -2.1
C9orf72Q96LT7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 RNU2-63P-201ENST00000410792 194 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AC097463.2-201ENST00000421074 142 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 DEFB108A-201ENST00000530110 222 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 MTCYBP23-201ENST00000558717 1102 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AL355297.2-201ENST00000604792 129 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AC025754.2-201ENST00000606491 432 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 RNU6-88P-201ENST00000606801 100 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AC097468.3-201ENST00000607956 456 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AC009233.1-201ENST00000616477 371 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 U4atac.1-201ENST00000618345 95 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 AC099654.8-201ENST00000637757 681 ntBASIC1.92□□□□□ -2.1
C9orf72Q96LT7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf72Q96LT7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 RNU6-1284P-201ENST00000363701 100 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 SNORA16.1-201ENST00000364597 132 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 RNU6-1280P-201ENST00000365211 107 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 RNU6-701P-201ENST00000384059 107 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 RPS24P7-201ENST00000416921 246 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 TXNL1P1-201ENST00000429528 554 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 MTND4P25-201ENST00000441039 533 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 RPL7P18-201ENST00000478965 734 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 SNORA31.25-201ENST00000517242 134 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 RNU2-19P-201ENST00000517288 84 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AP006587.4-201ENST00000526053 529 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AC012213.3-201ENST00000577199 777 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AC244517.12-201ENST00000623581 663 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AL356596.1-201ENST00000624230 379 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AC099654.9-201ENST00000637055 678 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 AL354685.2-201ENST00000448218 1447 ntBASIC1.91□□□□□ -2.1
C9orf72Q96LT7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.91□□□□□ -2.1
C9orf72Q96LT7 RNU6-188P-201ENST00000364207 107 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 SNORA4.1-201ENST00000364263 144 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 RNU6-748P-201ENST00000384648 107 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 SNORA26.9-201ENST00000391322 122 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 OR51A5P-201ENST00000415429 942 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 VPS26BP1-201ENST00000417155 755 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 AL592045.1-201ENST00000429867 352 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 RPS15AP9-201ENST00000439856 381 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 FABP5P13-201ENST00000452144 328 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 AC011005.2-201ENST00000487324 359 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 RNU6-143P-201ENST00000516942 93 ntBASIC1.9□□□□□ -2.11
C9orf72Q96LT7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.9□□□□□ -2.11
C9orf72Q96LT7 MIR3126-201ENST00000577443 74 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms