Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 TBCAP3-201ENST00000512475 312 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AC112206.3-201ENST00000514578 389 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 RNU6-189P-201ENST00000516120 101 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 RNA5SP165-201ENST00000517142 115 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AP003122.3-201ENST00000526316 255 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AC084851.1-201ENST00000529105 249 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AP000763.2-201ENST00000540641 163 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 BNIP3P25-201ENST00000596023 559 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 VN1R80P-201ENST00000597126 338 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AC012119.1-201ENST00000603184 222 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 ATP1B3P1-201ENST00000605365 821 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AC004805.2-201ENST00000605382 482 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 CTHRC1P1-201ENST00000605383 469 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AC007496.3-201ENST00000624987 3443 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 Y_RNA.33-201ENST00000362591 102 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 Y_RNA.167-201ENST00000363735 109 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 Y_RNA.399-201ENST00000383955 105 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 RNU6-140P-201ENST00000384566 108 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 MIR449B-201ENST00000384995 97 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 RNU6-510P-201ENST00000391239 108 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 RNU6-1025P-201ENST00000410629 104 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 AC092047.1-201ENST00000424997 240 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 AL360271.2-201ENST00000447710 161 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 HIGD1AP13-201ENST00000509878 289 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 FAM206BP-201ENST00000510179 541 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 RNU4-49P-201ENST00000516080 140 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 RNU6-1282P-201ENST00000516735 96 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 MIR2276-201ENST00000516886 89 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 AC011611.1-201ENST00000552179 197 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 MIR4276-201ENST00000584832 70 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 LARP7P1-201ENST00000605576 316 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 AC005858.4-201ENST00000623191 700 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 AC022418.1-201ENST00000624118 445 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 SRP72P2-201ENST00000344851 1979 ntBASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP3Q96JB5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 MAPK10-322ENST00000641485 4530 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 U3.12-201ENST00000364498 214 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 RNU6-395P-201ENST00000365662 106 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 RNU2-68P-201ENST00000410878 191 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 ZNF863P-201ENST00000426746 417 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 RPL23AP69-201ENST00000431134 458 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 HMGB3P11-201ENST00000440127 604 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 RNU7-167P-201ENST00000459160 62 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC008549.1-201ENST00000512900 643 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC087241.2-201ENST00000535801 324 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC007458.1-201ENST00000542812 373 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC073539.2-201ENST00000597113 165 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AL162713.1-201ENST00000604480 262 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 Z82243.1-201ENST00000609432 473 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC103705.1-201ENST00000619013 241 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 AC121333.1-201ENST00000567488 2709 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 FAM35BP-202ENST00000497389 3337 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 MTCO1P12-201ENST00000414273 1543 ntBASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CDK5RAP3Q96JB5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CDK5RAP3Q96JB5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDK5RAP3Q96JB5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDK5RAP3Q96JB5 AP002088.1-201ENST00000382740 395 ntBASIC3.74□□□□□ -1.81
CDK5RAP3Q96JB5 RNU6-831P-201ENST00000384548 107 ntBASIC3.74□□□□□ -1.81
CDK5RAP3Q96JB5 Y_RNA.530-201ENST00000384587 101 ntBASIC3.74□□□□□ -1.81
CDK5RAP3Q96JB5 RNU6-1179P-201ENST00000384667 107 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms