Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 RPL39P36-201ENST00000490784 156 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 RNU6-445P-201ENST00000516949 107 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 FAM92A1P1-201ENST00000528023 890 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AC087883.1-201ENST00000551882 391 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 MTCO3P13-201ENST00000577757 781 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AC023043.3-201ENST00000593113 385 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AC092794.1-201ENST00000612734 582 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 UBA52P6-201ENST00000399822 382 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 MTND3P21-201ENST00000433774 331 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AL451074.3-201ENST00000437709 472 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AL136380.1-201ENST00000447970 162 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 snoU13.22-201ENST00000459428 104 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 TRBV1-201ENST00000476502 284 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 RPS29P26-201ENST00000477483 171 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 RPS3AP14-201ENST00000483907 780 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AC011352.1-201ENST00000512300 793 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AC090572.1-201ENST00000519251 160 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AC109329.2-201ENST00000519658 482 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AP003072.2-201ENST00000527756 676 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AC021739.1-201ENST00000559631 174 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 ZNF861P-201ENST00000588126 639 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AL356280.1-201ENST00000603614 379 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AP000860.1-201ENST00000605250 559 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AC093732.2-201ENST00000607950 274 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AC006338.1-201ENST00000618453 749 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 AL158209.2-201ENST00000619266 216 ntBASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM5Q96HC4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 NACAP2-201ENST00000318548 624 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 RNU6-511P-201ENST00000363496 107 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 Y_RNA.296-201ENST00000364930 108 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 SNORA20.2-201ENST00000383922 131 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 Y_RNA.554-201ENST00000384672 102 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 MIR301A-201ENST00000385261 86 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AL139397.2-201ENST00000404529 772 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 SNORA11-201ENST00000408789 128 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AL451062.2-201ENST00000427515 271 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AC133104.1-201ENST00000429100 218 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AC119618.1-201ENST00000434191 222 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 HMGN2P10-201ENST00000448085 265 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AL441985.1-201ENST00000457727 251 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AC103975.1-201ENST00000482506 483 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 GZMAP1-201ENST00000503054 631 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 HMGB1P29-201ENST00000505659 499 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AF213884.2-201ENST00000510417 903 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AC091826.1-201ENST00000514065 313 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AC090616.3-201ENST00000582184 217 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AL391646.1-201ENST00000603860 190 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 MIR98-201ENST00000606724 119 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AC005046.1-201ENST00000608515 625 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms